STRINGSTRING
CV_4365 CV_4365 CV_2729 CV_2729 CV_3706 CV_3706 CV_1455 CV_1455
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CV_4365Probable multiple antibiotic resistance protein marC; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2095/TC:9.B.10.1.1. (215 aa)
CV_2729Probable multiple antibiotic resistance protein MarC; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2095/TC:9.B.10.1.1. (233 aa)
CV_3706Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2095/TC:9.B.10.1.2. (200 aa)
CV_1455Probable multiple antibiotic resistance protein MarC; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2095/TC:9.B.10.1.1. (209 aa)
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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