STRINGSTRING
fhuA fhuA CV_3896 CV_3896 CV_0077 CV_0077 CV_0494 CV_0494 oprC oprC CV_1019 CV_1019 CV_3188 CV_3188 CV_1491 CV_1491 CV_1699 CV_1699 CV_1970 CV_1970 CV_1982 CV_1982 fepA fepA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fhuAFerrichrome-iron outermembrane receptor protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1629/TC:1.B.14.1.4. (716 aa)
CV_3896Probable TonB-dependent receptor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1629/TC:1.B.14.2.4. (735 aa)
CV_0077Probable TonB-dependent receptor; Identified by sequence similarity; putative; ORF located using Blastx/COG1629/TC:1.B.14.1.6. (852 aa)
CV_0494Probable outer membrane receptor protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1629/TC:1.B.14.3.1. (615 aa)
oprCOuter membrane protein OprC complement; Identified by sequence similarity; putative; ORF located using Blastx/COG1629/TC:1.B.14.4.2. (642 aa)
CV_1019Probable TonB-dependent receptor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1629/TC:1.B.14.1.6. (894 aa)
CV_3188Probable TonB-dependent receptor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1629/TC:1.B.14.1.2. (783 aa)
CV_1491Probable outer membrane receptor; Identified by sequence similarity; putative; ORF located using Blastx/COG4771. (699 aa)
CV_1699Probable tonB-dependent receptor; Identified by sequence similarity; putative; ORF located using Blastx. (844 aa)
CV_1970Probable TonB-dependent receptor protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1629/TC:1.B.14.1.6. (854 aa)
CV_1982Probable tonB dependent receptor; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1629/TC:1.B.14.3.1. (868 aa)
fepAEnterobactin-iron outermembrane receptor protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1629/TC:1.B.14.7.1. (684 aa)
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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