STRINGSTRING
cysA2 cysA2 potA potA CV_1678 CV_1678 CV_0258 CV_0258 potG potG CV_1910 CV_1910 ugpC ugpC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cysA2Probable ABC transporter, ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (366 aa)
potAPolyamine transport protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (361 aa)
CV_1678Probable ABC transporter, ATP-binding protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1130; Belongs to the ABC transporter superfamily. (335 aa)
CV_0258Probable ABC transporter, sugar ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1130; Belongs to the ABC transporter superfamily. (372 aa)
potGSpermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (391 aa)
CV_1910Probable ABC transporter ATP-binding protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1130; Belongs to the ABC transporter superfamily. (347 aa)
ugpCSn-glycerol-3-phosphate transport, ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (370 aa)
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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