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spsC spsC adi adi CV_4034 CV_4034 CV_4032 CV_4032 goaG goaG rfbH rfbH gcvP gcvP CV_3394 CV_3394 CV_2819 CV_2819 CV_2804 CV_2804 metZ metZ tyrB1 tyrB1 serC serC argD argD CV_2025 CV_2025 CV_1935 CV_1935 metY metY CV_1900 CV_1900 kbl kbl cobC cobC aruC aruC CV_1451 CV_1451 CV_1436 CV_1436 DegT DegT aspB aspB glyA glyA tnaA tnaA nifS nifS CV_0995 CV_0995 CV_0803 CV_0803 CV_0021 CV_0021 CV_0038 CV_0038 hemL hemL CV_0133 CV_0133 tyrB2 tyrB2 dapC dapC hisC hisC CV_0750 CV_0750 bioF bioF CV_4309 CV_4309 bioA bioA CV_4124 CV_4124 metB metB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
spsCSpore coat polysaccharide biosynthesis protein C; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0399; Belongs to the DegT/DnrJ/EryC1 family. (404 aa)
adiArginine decarboxylase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1982. (752 aa)
CV_4034Probable aminotransferase; Identified by sequence similarity; putative; ORF located using Blastx/COG0399; Belongs to the DegT/DnrJ/EryC1 family. (383 aa)
CV_4032Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx; Belongs to the DegT/DnrJ/EryC1 family. (344 aa)
goaG4-aminobutyrate transaminase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0160; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (421 aa)
rfbHCDP-6deoxy-D-xylo-4-hexulose-3-dehydrase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0399; Belongs to the DegT/DnrJ/EryC1 family. (437 aa)
gcvPGlycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (950 aa)
CV_3394Probable cystathionine gamma-lyase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0626. (380 aa)
CV_2819Probable glutamate-1-semialdehyde aminotransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0001; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (453 aa)
CV_2804Probable diaminobutyrate-pyruvate transaminase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0160; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (426 aa)
metZO-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. (394 aa)
tyrB1Aromatic-amino-acid transaminase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1448. (402 aa)
serCPhosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (362 aa)
argDAcetylornithine aminotransferase; Identified by sequence similarity; putative; ORF located using Blastx/COG0161; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (412 aa)
CV_2025Probable aminotransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0161. (459 aa)
CV_1935Probable transcriptional regulator; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1167. (475 aa)
metYO-acetylhomoserine (thiol)-lyase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2873. (425 aa)
CV_1900Probable transcriptional regulator; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1167. (493 aa)
kblGlycine C-acetyltransferase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. (399 aa)
cobCCobalamin biosynthetic protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0079. (328 aa)
aruCAcetylornithine transaminase; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG0160; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (391 aa)
CV_1451Probable transcriptional regulator; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1167. (461 aa)
CV_1436Probable b-alanine-pyruvate transaminase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0161; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (446 aa)
DegTAspartate aminotransferase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0399; Belongs to the DegT/DnrJ/EryC1 family. (371 aa)
aspBAminotransferase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0399; Belongs to the DegT/DnrJ/EryC1 family. (367 aa)
glyAGlycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (415 aa)
tnaATryptophanase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG3033; Belongs to the beta-eliminating lyase family. (461 aa)
nifSPyridoxal-phosphate-dependent aminotransferase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. (405 aa)
CV_0995Probable aspartate transaminase; Identified by sequence similarity; putative; ORF located using Blastx/COG0436. (434 aa)
CV_0803Probable 5-aminolevulinate synthase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0156. (403 aa)
CV_0021Probable aminotransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0156. (403 aa)
CV_0038Probable histidinol-phosphate aminotransferase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0079. (364 aa)
hemLGlutamate-1-semialdehyde 2,1-aminomutase; Identified by sequence similarity; putative; ORF located using Blastx/COG0001. (425 aa)
CV_0133Probable transcriptional regulator; Identified by sequence similarity; putative; ORF located using Blastx/COG1167. (473 aa)
tyrB2Aromatic-amino-acid transaminase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1448. (397 aa)
dapCSuccinyldiaminopimelate transaminase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0436. (401 aa)
hisCHistidinol-phosphate aminotransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0079; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (356 aa)
CV_0750Probable glutamine-scyllo-inositol transaminase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0399; Belongs to the DegT/DnrJ/EryC1 family. (374 aa)
bioF8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. (383 aa)
CV_4309Probable L-allo-threonine aldolase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2008. (342 aa)
bioAAdenosylmethionine-8-amino-7-oxononanoate transaminase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0161; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (448 aa)
CV_4124Probable aminotransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0399; Belongs to the DegT/DnrJ/EryC1 family. (365 aa)
metBCystathionine gamma-synthase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0626. (381 aa)
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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