STRINGSTRING
cbsF cbsF CV_1543 CV_1543 CV_2802 CV_2802 entB entB entF entF iacP iacP CV_3951 CV_3951 acpP acpP CV_2803 CV_2803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cbsFSynthetase CbsF; Identified by sequence similarity; putative; ORF located using Blastx/COG0365/TC:9.B.17.1.4. (2859 aa)
CV_1543Hypothetical protein. (89 aa)
CV_2802Probable peptide synthetase protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1020. (3554 aa)
entBIsochorismatase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1535. (292 aa)
entFEnterobactin synthetase component F; Identified by sequence similarity; putative; ORF located using Blastx/COG1020. (1080 aa)
iacPAcyl carrier protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0236. (76 aa)
CV_3951Hypothetical protein. (112 aa)
acpPAcyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (91 aa)
CV_2803Probable peptide synthetase protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1020/TC:9.B.17.1.6. (3171 aa)
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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