STRINGSTRING
dnaA dnaA tar tar pilR pilR pilS pilS CV_0091 CV_0091 CV_0095 CV_0095 CV_0103 CV_0103 gltL gltL gltK gltK gltJ gltJ CV_0120 CV_0120 CV_0175 CV_0175 CV_0207 CV_0207 ompR ompR ompB ompB CV_0257 CV_0257 CV_0265 CV_0265 CV_0387 CV_0387 aer aer phoB phoB phoR phoR CV_0594 CV_0594 ctaA ctaA tap tap CV_0713 CV_0713 CV_0738 CV_0738 CV_0760 CV_0760 CV_0772 CV_0772 kpsD kpsD qseB qseB qseC qseC CV_0896 CV_0896 hydG hydG CV_0899 CV_0899 vanX vanX CV_0917 CV_0917 dctQ dctQ CV_0919 CV_0919 pstS pstS flgM flgM cheB2 cheB2 CV_1011 CV_1011 cheW3 cheW3 CV_1013 CV_1013 cheA2 cheA2 cheY2 cheY2 motA2 motA2 fliA1 fliA1 CV_1080 CV_1080 CV_1081 CV_1081 CV_1171 CV_1171 CV_1172 CV_1172 CV_1173 CV_1173 CV_1174 CV_1174 ampC ampC CV_1328 CV_1328 CV_1358 CV_1358 CV_1370 CV_1370 nahY nahY CV_1448 CV_1448 CV_1454 CV_1454 phoA2 phoA2 phoA1 phoA1 CV_1580 CV_1580 kdpE kdpE kdpD kdpD kdpC kdpC kdpB kdpB kdpA kdpA CV_1652 CV_1652 CV_1698 CV_1698 CV_1716 CV_1716 CV_1718 CV_1718 CV_1850 CV_1850 CV_1869 CV_1869 CV_2024 CV_2024 motA1 motA1 glnB glnB mucD mucD atoB atoB maeN maeN evgS evgS rcsB rcsB CV_2463 CV_2463 fliC2 fliC2 cheB1 cheB1 cheR1 cheR1 cheW1 cheW1 CV_2509 CV_2509 cheA1 cheA1 cheY1 cheY1 CV_2513 CV_2513 narX narX narL narL narI narI narJ narJ narH narH narG narG CV_2599 CV_2599 CV_2600 CV_2600 armS armS CV_2635 CV_2635 CV_2644 CV_2644 CV_2645 CV_2645 CV_2646 CV_2646 CV_2732 CV_2732 CV_2733 CV_2733 CV_2734 CV_2734 phaA phaA CV_2852 CV_2852 CV_2859 CV_2859 CV_2889 CV_2889 CV_2907 CV_2907 glnD glnD CV_2986 CV_2986 CV_2987 CV_2987 lafT lafT fliA2 fliA2 flaD flaD cheV3 cheV3 CV_3089 CV_3089 CV_3138 CV_3138 CV_3139 CV_3139 CV_3140 CV_3140 CV_3205 CV_3205 CV_3285 CV_3285 htrA htrA CV_3320 CV_3320 rpoN rpoN frdD frdD frdC frdC frdB frdB frdA frdA dcuB dcuB cheB3 cheB3 cheR2 cheR2 CV_3438 CV_3438 cheW2 cheW2 cheA cheA cheY4 cheY4 CV_3444 CV_3444 CV_3445 CV_3445 cheV2 cheV2 cheV1 cheV1 cheY3 cheY3 CV_3450 CV_3450 CV_3505 CV_3505 glnA glnA ntrB ntrB glnG glnG CV_3649 CV_3649 cioB cioB cioA cioA cheR3 cheR3 dctA dctA CV_3843 CV_3843 CV_3844 CV_3844 CV_3866 CV_3866 fliC3 fliC3 fliC1 fliC1 natC natC ddpX ddpX petC petC petB petB petA petA wecC wecC wecB wecB neuC neuC spsC spsC CV_4155 CV_4155 CV_4156 CV_4156 glsA glsA pilE2 pilE2 CV_4218 CV_4218 CV_4220 CV_4220 CV_4244 CV_4244 phoD phoD trg trg CV_4298 CV_4298
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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dnaAChromosomal replication iniciator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. (467 aa)
tarMethyl-accepting chemotaxis protein II; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840. (660 aa)
pilRTwo-component system, regulatory protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2204. (437 aa)
pilSTwo-component system sensor protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0642. (518 aa)
CV_0091Probable two-component response regulator; Identified by sequence similarity; putative; ORF located using Blastx/COG0745. (405 aa)
CV_0095Probable methyl-accepting chemotaxis transducer; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0840. (542 aa)
CV_0103Probable two-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2972. (353 aa)
gltLABC superfamily (glutamate/aspartate transporter), ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1126. (244 aa)
gltKGlutamate/aspartate transport system permease protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0765/TC:3.A.1.3.4. (222 aa)
gltJGlutamate/aspartate transport system permease; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0765/TC:3.A.1.3.4. (246 aa)
CV_0120Probable amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0834/TC:3.A.1.3.4. (302 aa)
CV_0175Probable cytochrome C transmembrane protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2010. (101 aa)
CV_0207Probable two-component system, regulatory protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG3279. (242 aa)
ompRResponse regulator OmpR; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0745. (243 aa)
ompBProtein histidine kinase/phosphatase sensor for OmpR; Identified by sequence similarity; putative; ORF located using Blastx. (428 aa)
CV_0257Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840. (540 aa)
CV_0265Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0840. (565 aa)
CV_0387Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2202. (334 aa)
aerAerotaxis receptor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2202. (186 aa)
phoBPhosphate regulon transcriptional regulatory protein phoB; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0745. (229 aa)
phoRPhosphate regulon sensor protein phoR; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0642. (435 aa)
CV_0594Probable two-component sensor histidine kinase protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0642. (467 aa)
ctaACytochrome aa3 oxidase assembly protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1612. (343 aa)
tapMethyl-accepting chemotaxis protein IV; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840. (543 aa)
CV_0713Probable methyl-accepting chemotaxis transducer; Identified by sequence similarity; putative; ORF located using Blastx. (690 aa)
CV_0738Probable transcriptional regulator Crp/Fnr-family; Identified by sequence similarity; putative; ORF located using Blastx/COG0664. (232 aa)
CV_0760Probable two-component sensor protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0642. (450 aa)
CV_0772Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG3206/TC:8.A.3.3.2. (401 aa)
kpsDCapsule polysaccharide export system periplasmic protein; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1596/TC:1.B.18.1.2. (630 aa)
qseBTranscriptional regulatory protein qseB; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0745. (220 aa)
qseCSensor protein qseC; Identified by sequence similarity; putative; ORF located using Blastx/COG0642. (448 aa)
CV_0896Probable two-component sensor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0642. (413 aa)
hydGTwo-component response sensor- transcriptional regulatory protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784. (174 aa)
CV_0899Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840. (663 aa)
vanXD-alanyl-d-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. (191 aa)
CV_0917Probable C4-dicarboxylate transporter large subunit; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1593/TC:2.A.56.1.1. (442 aa)
dctQC4-dicarboxylate transport system, permease small subunit; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG3090/TC:2.A.56.1.1. (196 aa)
CV_0919Probable C4-dicarboxylate-binding periplasmic protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1638/TC:2.A.56.1.1. (334 aa)
pstSABC transporter phosphate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. (345 aa)
flgMNegative regulator of flagellin synthesis; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2747. (99 aa)
cheB2Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (356 aa)
CV_1011Probable methyl-accepting chemotaxis protein II; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840. (539 aa)
cheW3Signal transduction chemotaxis protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0835. (181 aa)
CV_1013Probable methyl-accepting chemotaxis protein II; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840. (536 aa)
cheA2Chemotaxis protein CheA; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0643. (737 aa)
cheY2Chemotaxis protein CheY; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0784. (122 aa)
motA2Chemotaxis motA protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1291/TC:1.A.30.1.2. (249 aa)
fliA1RNA polymerase sigma factor for flagellar operon; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (248 aa)
CV_1080Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840. (628 aa)
CV_1081Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0840. (627 aa)
CV_1171Probable cytochrome-c oxidase, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (309 aa)
CV_1172Hypothetical protein. (63 aa)
CV_1173Probable cytochrome-c oxidase, subunit II; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2993. (204 aa)
CV_1174Probable cytochrome-c oxidase, subunit I; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG3278/TC:3.D.4.3.1; Belongs to the heme-copper respiratory oxidase family. (474 aa)
ampCBeta-lactamase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1680. (396 aa)
CV_1328Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0840. (532 aa)
CV_1358Probable methyl-accepting chemotaxis protein IV; Identified by sequence similarity; putative; ORF located using Blastx/COG0840. (599 aa)
CV_1370Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1638/TC:2.A.56.1.1. (367 aa)
nahYMethyl-accepting chemotaxis transducer protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0840. (549 aa)
CV_1448Probable glutamine synthetase; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG0174; Belongs to the glutamine synthetase family. (462 aa)
CV_1454Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2202. (444 aa)
phoA2Alkaline phosphatase precursor; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1785; Belongs to the alkaline phosphatase family. (457 aa)
phoA1Alkaline phosphatase precursor; Identified by sequence similarity; putative; ORF located using Blastx/COG1785; Belongs to the alkaline phosphatase family. (511 aa)
CV_1580Probable two-component hybrid sensor-regulator protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2201. (537 aa)
kdpEKdp operon transcriptional regulatory protein kdpE; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0745. (244 aa)
kdpDTwo-component regulatory protein sensor kinase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0642. (895 aa)
kdpCK+-transporting ATPase; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex. (206 aa)
kdpBPotassium-transporting ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily. (705 aa)
kdpAK+-transporting ATPase; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. (602 aa)
CV_1652Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0840. (317 aa)
CV_1698Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2202. (441 aa)
CV_1716Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840. (693 aa)
CV_1718Probable sensor/response regulator hybrid; Identified by sequence similarity; putative; ORF located using Blastx/COG0642. (561 aa)
CV_1850Probable methyl-accepting chemotaxis transducer; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840. (544 aa)
CV_1869Probable two-component response regulator, LuxR family; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2197. (222 aa)
CV_2024Probable glutamine synthetase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0174; Belongs to the glutamine synthetase family. (444 aa)
motA1Chemotaxis motA protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1291/TC:1.A.30.1.1. (284 aa)
glnBNitrogen regulatory protein P-II-1; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0347; Belongs to the P(II) protein family. (112 aa)
mucDSerine protease MucD precursor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0265; Belongs to the peptidase S1C family. (470 aa)
atoBacetyl-CoA C-acetyltransferase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0183; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
maeNNa+/malate symporter; Identified by sequence similarity; putative; ORF located using Blastx/COG3493/TC:2.A.24.2.3. (440 aa)
evgSSensor protein evgS precursor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784. (787 aa)
rcsBCapsula synthesis response regulator transcription regulator protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2197. (231 aa)
CV_2463Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840. (544 aa)
fliC2Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (285 aa)
cheB1Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (359 aa)
cheR1Probable chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (283 aa)
cheW1Signal transduction chemotaxis protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0835. (179 aa)
CV_2509Probable methyl-accepting chemotaxis transducer transmembrane protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840. (554 aa)
cheA1Chemotaxis protein CheA; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0643. (721 aa)
cheY1Chemotaxis protein CheY; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784. (122 aa)
CV_2513Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0840. (382 aa)
narXTransmembrane nitrate/nitrite sensor kinase transcription regulator protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0642. (632 aa)
narLNitrate/nitrite response regulator protein narL; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2197. (215 aa)
narINitrate reductase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2181/TC:5.A.3.1.1. (228 aa)
narJNitrate reductase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2180. (213 aa)
narHNitrate reductase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1140. (516 aa)
narGRespiratory nitrate reductase alpha chain; Identified by sequence similarity; putative; ORF located using Blastx/COG0243; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1233 aa)
CV_2599Probable two-component response regulator, LuxR family; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2197. (217 aa)
CV_2600Probable two-component sensor/regulator; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0784. (924 aa)
armSTwo-component sensor kinase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0642. (414 aa)
CV_2635Probable two-component response regulator; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0745. (221 aa)
CV_2644Probable two-component response regulator; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784. (566 aa)
CV_2645Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1366. (102 aa)
CV_2646Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0840. (388 aa)
CV_2732Probable membrane protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0845/TC:8.A.1.6.1; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (412 aa)
CV_2733Probable drug efflux pump transmembrane protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0841/TC:2.A.6.2.12; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1033 aa)
CV_2734Probable drug efflux pump transmembrane protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0841/TC:2.A.6.2.12; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1034 aa)
phaAacetyl-CoA C-acetyltransferase; Involved in the production of polyhydroxyalkonic acids (PHAs), composed primarily of 3-hydroxybutyric acid (3HB) and 3- hydroxyvaleric acid (3HV); Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
CV_2852Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0840. (502 aa)
CV_2859Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0840. (538 aa)
CV_2889Probable chemotaxis regulator protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0784. (125 aa)
CV_2907Probable methyl-accepting chemotaxis transmembrane protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0840. (535 aa)
glnDprotein-PII uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism. (856 aa)
CV_2986Hypothetical protein. (123 aa)
CV_2987Probable transcription regulator, Crp/Fnr family; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0664. (228 aa)
lafTChemotaxis lafT protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1291/TC:1.A.30.1.1. (288 aa)
fliA2RNA polymerase sigma factor for flagellar operon; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1191; Belongs to the sigma-70 factor family. (231 aa)
flaDFlagellin D; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (372 aa)
cheV3Chemotaxis protein CheV; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784. (314 aa)
CV_3089Probable two-component system; Identified by sequence similarity; putative; ORF located using Blastx/COG0642. (414 aa)
CV_3138Probable two-component response regulator; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2204. (458 aa)
CV_3139Probable protein-glutamate methylesterase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2201. (251 aa)
CV_3140Probable protein-tyrosine-phosphatase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0394; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (125 aa)
CV_3205Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0643. (368 aa)
CV_3285Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840. (629 aa)
htrAPeriplasmic serine protease; Identified by sequence similarity; putative; ORF located using Blastx/COG0265; Belongs to the peptidase S1C family. (488 aa)
CV_3320Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840. (661 aa)
rpoNRNA polymerase N (sigma54) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (466 aa)
frdDFumarate reductase, subunit D; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane; Belongs to the FrdD family. (120 aa)
frdCFumarate reductase, subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane; Belongs to the FrdC family. (132 aa)
frdBFumarate reductase, subunit B; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0479. (248 aa)
frdAFumarate reductase flavoprotein subunit; Identified by sequence similarity; putative; ORF located using Blastx/COG1053. (591 aa)
dcuBAnaerobic C4-dicarboxylate membrane transporter protein; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family. (442 aa)
cheB3Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (359 aa)
cheR2Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (298 aa)
CV_3438Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2202. (984 aa)
cheW2Purine-binding chemotaxis protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0835. (166 aa)
cheAChemotaxis protein CheA; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0643. (748 aa)
cheY4Chemotaxis protein cheY; Identified by sequence similarity; putative; ORF located using Blastx/COG0784. (121 aa)
CV_3444Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1366. (91 aa)
CV_3445Probable two-component sensor; Identified by sequence similarity; putative; ORF located using Blastx. (381 aa)
cheV2Chemotaxis protein CheV; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784. (317 aa)
cheV1Chemotaxis protein CheV; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784. (313 aa)
cheY3Chemotaxis regulator protein CheY; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784. (131 aa)
CV_3450Probable chemotaxis protein CheA; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0643. (633 aa)
CV_3505Probable two-component response regulator; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0784. (402 aa)
glnAGlutamine synthetase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0174. (472 aa)
ntrBTwo-component sensor NtrB; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0642. (352 aa)
glnGNitrogen assimilation regulatory response regulator/transcription regulator protein; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (470 aa)
CV_3649Probable methyl-accepting chemotaxis protein with HAMP domain; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0840. (671 aa)
cioBCytochrome bd-I oxidase subunit II; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1294. (336 aa)
cioACyanide insensitive terminal oxidase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1271. (448 aa)
cheR3Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (285 aa)
dctAC4-dicarboxylic acids transport protein (Na+/H+ dicarboxylate symporter); Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (441 aa)
CV_3843Probable two-component response regulator; Identified by sequence similarity; putative; ORF located using Blastx/COG0745. (237 aa)
CV_3844Probable two-component sensor protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0642. (424 aa)
CV_3866Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0840. (542 aa)
fliC3Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (282 aa)
fliC1Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (282 aa)
natCPeriplasmic type I secretion system; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1538/TC:1.B.17.1.1. (444 aa)
ddpXProbable d-alanyl-d-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. (203 aa)
petCUbiquinol-cytochrome c reductase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2857/TC:3.D.3.2.1. (254 aa)
petBUbiquinol-cytochrome c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (447 aa)
petAUbiquinol-cytochrome c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (194 aa)
wecCUDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0677; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (413 aa)
wecBUDP-N-acetylglucosamine 2-epimerase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0381; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (381 aa)
neuCN-acetylglucosamine-6-phosphate 2-epimerase/N-acetylglucosamine-6-phosphatase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0381. (386 aa)
spsCSpore coat polysaccharide biosynthesis protein C; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0399; Belongs to the DegT/DnrJ/EryC1 family. (404 aa)
CV_4155Probable methyl-accepting chemotaxis transducer; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0840. (547 aa)
CV_4156Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840/TC:8.A.3.1.1. (625 aa)
glsAProbable glutaminase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2066; Belongs to the glutaminase family. (304 aa)
pilE2Type IV pilin; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2165; Belongs to the N-Me-Phe pilin family. (155 aa)
CV_4218Probable two-component system sensor kinase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0642. (467 aa)
CV_4220Probable two-component transcriptional regulator; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2204. (446 aa)
CV_4244Probable methyl-accepting chemotaxis transducer; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840. (549 aa)
phoDIdentified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG3540. (701 aa)
trgMethyl-accepting chemotaxis protein III (MCP-III); Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG0840. (545 aa)
CV_4298Probable glutamine synthetase; Identified by sequence similarity; putative; ORF located using Blastx/COG0174; Belongs to the glutamine synthetase family. (448 aa)
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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