(20 nodes) Dwarfin, and Domain of unknown function (DUF3480) network (Cynoglossus semilaevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	smad1	Mothers against decapentaplegic homolog. (470 aa)
	LOC103384737	V-ski avian sarcoma viral oncogene homolog a. (736 aa)
	smurf1	E3 ubiquitin-protein ligase. (729 aa)
	LOC103397887	Mothers against decapentaplegic homolog. (510 aa)
	smad6	Mothers against decapentaplegic homolog. (491 aa)
	LOC103380246	Mothers against decapentaplegic homolog. (425 aa)
	LOC103397451	Mothers against decapentaplegic homolog. (437 aa)
	LOC103383976	E3 ubiquitin-protein ligase. (777 aa)
	LOC103389944	Zinc finger, FYVE domain containing 16. (1421 aa)
	smad9	Mothers against decapentaplegic homolog. (468 aa)
	SMAD3	Mothers against decapentaplegic homolog. (425 aa)
	LOC103379083	Mothers against decapentaplegic homolog. (548 aa)
	LOC103391130	Mothers against decapentaplegic homolog. (473 aa)
	LOC103393707	SMAD specific E3 ubiquitin protein ligase 2. (794 aa)
	LOC103396454	SKI-like proto-oncogene a. (766 aa)
	LOC103394304	Mothers against decapentaplegic homolog. (573 aa)
	SMAD4	Mothers against decapentaplegic homolog. (503 aa)
	smad7	Mothers against decapentaplegic homolog. (376 aa)
	LOC103397675	Zinc finger, FYVE domain containing 9b. (923 aa)
	zfyve9	Zinc finger, FYVE domain containing 9a. (1188 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103379083	LOC103380246	ENSCSEP00000019746	ENSCSEP00000011015	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.934
LOC103379083	LOC103383976	ENSCSEP00000019746	ENSCSEP00000015800	Mothers against decapentaplegic homolog.	E3 ubiquitin-protein ligase.	0.977
LOC103379083	LOC103384737	ENSCSEP00000019746	ENSCSEP00000004673	Mothers against decapentaplegic homolog.	V-ski avian sarcoma viral oncogene homolog a.	0.450
LOC103379083	LOC103389944	ENSCSEP00000019746	ENSCSEP00000018255	Mothers against decapentaplegic homolog.	Zinc finger, FYVE domain containing 16.	0.530
LOC103379083	LOC103391130	ENSCSEP00000019746	ENSCSEP00000021439	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.943
LOC103379083	LOC103393707	ENSCSEP00000019746	ENSCSEP00000022444	Mothers against decapentaplegic homolog.	SMAD specific E3 ubiquitin protein ligase 2.	0.977
LOC103379083	LOC103394304	ENSCSEP00000019746	ENSCSEP00000024049	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.461
LOC103379083	LOC103396454	ENSCSEP00000019746	ENSCSEP00000022545	Mothers against decapentaplegic homolog.	SKI-like proto-oncogene a.	0.511
LOC103379083	LOC103397675	ENSCSEP00000019746	ENSCSEP00000031258	Mothers against decapentaplegic homolog.	Zinc finger, FYVE domain containing 9b.	0.518
LOC103379083	LOC103397887	ENSCSEP00000019746	ENSCSEP00000010634	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.461
LOC103379083	SMAD3	ENSCSEP00000019746	ENSCSEP00000019724	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.934
LOC103379083	SMAD4	ENSCSEP00000019746	ENSCSEP00000026341	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.461
LOC103379083	smad1	ENSCSEP00000019746	ENSCSEP00000000526	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.943
LOC103379083	smad6	ENSCSEP00000019746	ENSCSEP00000010996	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.902
LOC103379083	smad7	ENSCSEP00000019746	ENSCSEP00000031014	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.906
LOC103379083	smad9	ENSCSEP00000019746	ENSCSEP00000019062	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.943
LOC103379083	smurf1	ENSCSEP00000019746	ENSCSEP00000009538	Mothers against decapentaplegic homolog.	E3 ubiquitin-protein ligase.	0.977
LOC103379083	zfyve9	ENSCSEP00000019746	ENSCSEP00000033382	Mothers against decapentaplegic homolog.	Zinc finger, FYVE domain containing 9a.	0.530
LOC103380246	LOC103379083	ENSCSEP00000011015	ENSCSEP00000019746	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.934
LOC103380246	LOC103383976	ENSCSEP00000011015	ENSCSEP00000015800	Mothers against decapentaplegic homolog.	E3 ubiquitin-protein ligase.	0.626