16 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	zfpm1	Zinc finger protein, FOG family member 1. (1188 aa)
	ldb2	LIM domain binding 2a. (507 aa)
	LOC103386174	GATA binding protein 2a. (448 aa)
	LOC103387376	LIM domain binding 1a. (383 aa)
	lmo1	LIM domain only 1. (155 aa)
	LOC103386310	GATA binding protein 1a. (429 aa)
	lmo2	LIM domain only 2 (rhombotin-like 1). (162 aa)
	LOC103389730	Runt-related transcription factor. (492 aa)
	LOC103384168	BHLH domain-containing protein. (423 aa)
	TCF4	Transcription factor 4. (778 aa)
	LOC103384347	LIM-domain binding 1b. (374 aa)
	LOC103396034	T-cell acute lymphocytic leukemia 1. (467 aa)
	lmo3	LIM domain only 3. (156 aa)
	lhx2	LIM homeobox 2b. (423 aa)
	Gata1	Uncharacterized protein. (289 aa)
	cbfb	Core-binding factor subunit beta. (188 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Gata1	LOC103384168	ENSCSEP00000028010	ENSCSEP00000021574	Uncharacterized protein.	BHLH domain-containing protein.	0.759
Gata1	LOC103384347	ENSCSEP00000028010	ENSCSEP00000025330	Uncharacterized protein.	LIM-domain binding 1b.	0.595
Gata1	LOC103386174	ENSCSEP00000028010	ENSCSEP00000008367	Uncharacterized protein.	GATA binding protein 2a.	0.503
Gata1	LOC103387376	ENSCSEP00000028010	ENSCSEP00000012476	Uncharacterized protein.	LIM domain binding 1a.	0.595
Gata1	LOC103389730	ENSCSEP00000028010	ENSCSEP00000020795	Uncharacterized protein.	Runt-related transcription factor.	0.601
Gata1	LOC103396034	ENSCSEP00000028010	ENSCSEP00000025387	Uncharacterized protein.	T-cell acute lymphocytic leukemia 1.	0.850
Gata1	TCF4	ENSCSEP00000028010	ENSCSEP00000024794	Uncharacterized protein.	Transcription factor 4.	0.420
Gata1	cbfb	ENSCSEP00000028010	ENSCSEP00000033099	Uncharacterized protein.	Core-binding factor subunit beta.	0.614
Gata1	ldb2	ENSCSEP00000028010	ENSCSEP00000006909	Uncharacterized protein.	LIM domain binding 2a.	0.587
Gata1	lmo1	ENSCSEP00000028010	ENSCSEP00000015310	Uncharacterized protein.	LIM domain only 1.	0.543
Gata1	lmo2	ENSCSEP00000028010	ENSCSEP00000020468	Uncharacterized protein.	LIM domain only 2 (rhombotin-like 1).	0.944
Gata1	lmo3	ENSCSEP00000028010	ENSCSEP00000025523	Uncharacterized protein.	LIM domain only 3.	0.543
Gata1	zfpm1	ENSCSEP00000028010	ENSCSEP00000000512	Uncharacterized protein.	Zinc finger protein, FOG family member 1.	0.893
LOC103384168	Gata1	ENSCSEP00000021574	ENSCSEP00000028010	BHLH domain-containing protein.	Uncharacterized protein.	0.759
LOC103384168	LOC103384347	ENSCSEP00000021574	ENSCSEP00000025330	BHLH domain-containing protein.	LIM-domain binding 1b.	0.810
LOC103384168	LOC103386174	ENSCSEP00000021574	ENSCSEP00000008367	BHLH domain-containing protein.	GATA binding protein 2a.	0.666
LOC103384168	LOC103386310	ENSCSEP00000021574	ENSCSEP00000015426	BHLH domain-containing protein.	GATA binding protein 1a.	0.759
LOC103384168	LOC103387376	ENSCSEP00000021574	ENSCSEP00000012476	BHLH domain-containing protein.	LIM domain binding 1a.	0.810
LOC103384168	LOC103389730	ENSCSEP00000021574	ENSCSEP00000020795	BHLH domain-containing protein.	Runt-related transcription factor.	0.643
LOC103384168	TCF4	ENSCSEP00000021574	ENSCSEP00000024794	BHLH domain-containing protein.	Transcription factor 4.	0.761