(21 nodes) Myogenesis, and DNA-binding protein inhibitor network (Cynoglossus semilaevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	id2	Inhibitor of DNA binding 2a. (143 aa)
	LOC103379946	Myogenic factor. (296 aa)
	myf5	Myogenic factor. (246 aa)
	myf6	Myogenic factor 6. (241 aa)
	ascl1	Achaete-scute family bHLH transcription factor 1a. (189 aa)
	myog	Myogenin. (243 aa)
	LOC103386138	Mitogen-activated protein kinase. (361 aa)
	LOC103376623	Transcription factor 3b. (632 aa)
	ENSCSEP00000009148	MADS-box domain-containing protein. (90 aa)
	MEF2D	Myocyte enhancer factor 2D. (598 aa)
	ENSCSEP00000010899	Uncharacterized protein. (249 aa)
	id1	Inhibitor of DNA binding 1, HLH protein. (179 aa)
	LOC103388711	Myocyte enhancer factor 2d. (600 aa)
	LOC103379291	MADS-box domain-containing protein. (463 aa)
	ENSCSEP00000016973	Myogenic factor. (214 aa)
	LOC103380476	BHLH domain-containing protein. (495 aa)
	LOC103388899	Inhibitor of DNA binding 4. (144 aa)
	mef2c	Myocyte enhancer factor 2cb. (471 aa)
	LOC103395943	Transcription factor 3a. (649 aa)
	tcf12	Transcription factor 12. (716 aa)
	nkx2-5	NK2 homeobox 5. (329 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000009148	ENSCSEP00000010899	ENSCSEP00000009148	ENSCSEP00000010899	MADS-box domain-containing protein.	Uncharacterized protein.	0.502
ENSCSEP00000009148	ENSCSEP00000016973	ENSCSEP00000009148	ENSCSEP00000016973	MADS-box domain-containing protein.	Myogenic factor.	0.577
ENSCSEP00000009148	LOC103376623	ENSCSEP00000009148	ENSCSEP00000008989	MADS-box domain-containing protein.	Transcription factor 3b.	0.452
ENSCSEP00000009148	LOC103379291	ENSCSEP00000009148	ENSCSEP00000015956	MADS-box domain-containing protein.	MADS-box domain-containing protein.	0.692
ENSCSEP00000009148	LOC103379946	ENSCSEP00000009148	ENSCSEP00000003405	MADS-box domain-containing protein.	Myogenic factor.	0.577
ENSCSEP00000009148	LOC103386138	ENSCSEP00000009148	ENSCSEP00000007966	MADS-box domain-containing protein.	Mitogen-activated protein kinase.	0.623
ENSCSEP00000009148	LOC103388711	ENSCSEP00000009148	ENSCSEP00000015658	MADS-box domain-containing protein.	Myocyte enhancer factor 2d.	0.732
ENSCSEP00000009148	LOC103395943	ENSCSEP00000009148	ENSCSEP00000022335	MADS-box domain-containing protein.	Transcription factor 3a.	0.452
ENSCSEP00000009148	MEF2D	ENSCSEP00000009148	ENSCSEP00000010426	MADS-box domain-containing protein.	Myocyte enhancer factor 2D.	0.732
ENSCSEP00000009148	mef2c	ENSCSEP00000009148	ENSCSEP00000022248	MADS-box domain-containing protein.	Myocyte enhancer factor 2cb.	0.691
ENSCSEP00000009148	myf5	ENSCSEP00000009148	ENSCSEP00000006862	MADS-box domain-containing protein.	Myogenic factor.	0.577
ENSCSEP00000009148	myf6	ENSCSEP00000009148	ENSCSEP00000006878	MADS-box domain-containing protein.	Myogenic factor 6.	0.726
ENSCSEP00000009148	myog	ENSCSEP00000009148	ENSCSEP00000007229	MADS-box domain-containing protein.	Myogenin.	0.767
ENSCSEP00000009148	nkx2-5	ENSCSEP00000009148	ENSCSEP00000031470	MADS-box domain-containing protein.	NK2 homeobox 5.	0.907
ENSCSEP00000009148	tcf12	ENSCSEP00000009148	ENSCSEP00000029797	MADS-box domain-containing protein.	Transcription factor 12.	0.452
ENSCSEP00000010899	ENSCSEP00000009148	ENSCSEP00000010899	ENSCSEP00000009148	Uncharacterized protein.	MADS-box domain-containing protein.	0.502
ENSCSEP00000010899	ENSCSEP00000016973	ENSCSEP00000010899	ENSCSEP00000016973	Uncharacterized protein.	Myogenic factor.	0.478
ENSCSEP00000010899	LOC103379946	ENSCSEP00000010899	ENSCSEP00000003405	Uncharacterized protein.	Myogenic factor.	0.478
ENSCSEP00000010899	LOC103386138	ENSCSEP00000010899	ENSCSEP00000007966	Uncharacterized protein.	Mitogen-activated protein kinase.	0.955
ENSCSEP00000010899	MEF2D	ENSCSEP00000010899	ENSCSEP00000010426	Uncharacterized protein.	Myocyte enhancer factor 2D.	0.900