(15 nodes) Class I peroxisomal membrane protein import network (Cynoglossus semilaevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pex13	Peroxisomal biogenesis factor 13. (406 aa)
	pex14	Peroxisomal biogenesis factor 14. (365 aa)
	pex3	Peroxisomal biogenesis factor 3. (361 aa)
	pxmp2	Peroxisomal membrane protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family. (194 aa)
	pex16	Peroxisomal membrane protein PEX16. (344 aa)
	abcd3	ATP-binding cassette, sub-family D (ALD), member 3a. (660 aa)
	ENSCSEP00000019453	Uncharacterized protein. (220 aa)
	abcd2	ATP-binding cassette, sub-family D (ALD), member 2. (738 aa)
	ENSCSEP00000021517	Peroxisomal biogenesis factor 11 alpha. (246 aa)
	LOC103393022	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (313 aa)
	LOC103395856	Peroxisomal biogenesis factor 11 gamma. (233 aa)
	pex11b	Peroxisomal biogenesis factor 11 beta. (257 aa)
	LOC103393248	Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family. (351 aa)
	pxmp4	Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family. (214 aa)
	pex19	Peroxisomal biogenesis factor 19. (294 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000019453	LOC103393022	ENSCSEP00000019453	ENSCSEP00000022421	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.588
ENSCSEP00000019453	LOC103393248	ENSCSEP00000019453	ENSCSEP00000028888	Uncharacterized protein.	Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.588
ENSCSEP00000019453	LOC103395856	ENSCSEP00000019453	ENSCSEP00000028612	Uncharacterized protein.	Peroxisomal biogenesis factor 11 gamma.	0.901
ENSCSEP00000019453	abcd2	ENSCSEP00000019453	ENSCSEP00000019507	Uncharacterized protein.	ATP-binding cassette, sub-family D (ALD), member 2.	0.606
ENSCSEP00000019453	abcd3	ENSCSEP00000019453	ENSCSEP00000014436	Uncharacterized protein.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.563
ENSCSEP00000019453	pex11b	ENSCSEP00000019453	ENSCSEP00000028775	Uncharacterized protein.	Peroxisomal biogenesis factor 11 beta.	0.934
ENSCSEP00000019453	pex13	ENSCSEP00000019453	ENSCSEP00000002510	Uncharacterized protein.	Peroxisomal biogenesis factor 13.	0.874
ENSCSEP00000019453	pex14	ENSCSEP00000019453	ENSCSEP00000008328	Uncharacterized protein.	Peroxisomal biogenesis factor 14.	0.801
ENSCSEP00000019453	pex16	ENSCSEP00000019453	ENSCSEP00000012278	Uncharacterized protein.	Peroxisomal membrane protein PEX16.	0.713
ENSCSEP00000019453	pex19	ENSCSEP00000019453	ENSCSEP00000033234	Uncharacterized protein.	Peroxisomal biogenesis factor 19.	0.922
ENSCSEP00000019453	pex3	ENSCSEP00000019453	ENSCSEP00000009062	Uncharacterized protein.	Peroxisomal biogenesis factor 3.	0.775
ENSCSEP00000019453	pxmp2	ENSCSEP00000019453	ENSCSEP00000012125	Uncharacterized protein.	Peroxisomal membrane protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.465
ENSCSEP00000019453	pxmp4	ENSCSEP00000019453	ENSCSEP00000029720	Uncharacterized protein.	Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.647
ENSCSEP00000021517	LOC103393022	ENSCSEP00000021517	ENSCSEP00000022421	Peroxisomal biogenesis factor 11 alpha.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.630
ENSCSEP00000021517	LOC103393248	ENSCSEP00000021517	ENSCSEP00000028888	Peroxisomal biogenesis factor 11 alpha.	Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.630
ENSCSEP00000021517	abcd2	ENSCSEP00000021517	ENSCSEP00000019507	Peroxisomal biogenesis factor 11 alpha.	ATP-binding cassette, sub-family D (ALD), member 2.	0.676
ENSCSEP00000021517	abcd3	ENSCSEP00000021517	ENSCSEP00000014436	Peroxisomal biogenesis factor 11 alpha.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.727
ENSCSEP00000021517	pex13	ENSCSEP00000021517	ENSCSEP00000002510	Peroxisomal biogenesis factor 11 alpha.	Peroxisomal biogenesis factor 13.	0.910
ENSCSEP00000021517	pex14	ENSCSEP00000021517	ENSCSEP00000008328	Peroxisomal biogenesis factor 11 alpha.	Peroxisomal biogenesis factor 14.	0.905
ENSCSEP00000021517	pex16	ENSCSEP00000021517	ENSCSEP00000012278	Peroxisomal biogenesis factor 11 alpha.	Peroxisomal membrane protein PEX16.	0.807