STRINGSTRING
mnat1 mnat1 ercc2 ercc2 gtf2e2 gtf2e2 gtf2a1l gtf2a1l gtf2h1 gtf2h1 LOC103392281 LOC103392281 gtf2h3 gtf2h3 gtf2e1 gtf2e1 LOC103397561 LOC103397561 gtf2f2 gtf2f2 ercc3 ercc3 gtf2b gtf2b gtf2h4 gtf2h4 gtf2a1 gtf2a1 GTF2A2 GTF2A2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mnat1MNAT1 component of CDK activating kinase. (311 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (286 aa)
gtf2a1lGeneral transcription factor IIA, 1-like. (393 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (551 aa)
LOC103392281General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (277 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (327 aa)
gtf2e1General transcription factor IIE, polypeptide 1, alpha. (443 aa)
LOC103397561General transcription factor IIH subunit. (414 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (270 aa)
ercc3Excision repair cross-complementation group 3. (785 aa)
gtf2bGeneral transcription factor IIB. (318 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (461 aa)
gtf2a1General transcription factor IIA, 1. (415 aa)
GTF2A2General transcription factor IIA subunit 2. (71 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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