13 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	polr2l	Polymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
	polr1e	RNA polymerase I subunit E. (402 aa)
	cd3eap	CD3e molecule, epsilon associated protein. (380 aa)
	znrd1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (115 aa)
	polr2f	Polymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
	POLR2E	RNA polymerase II subunit E. (229 aa)
	polr1b	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1134 aa)
	twistnb	SHS2_Rpb7-N domain-containing protein. (373 aa)
	polr2h	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (155 aa)
	polr2k	Polymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
	Polr1c	RNA polymerase I and III subunit C. (346 aa)
	LOC103391314	RNA polymerase I and III subunit D. (146 aa)
	polr1a	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1628 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103391314	POLR2E	ENSCSEP00000028542	ENSCSEP00000011072	RNA polymerase I and III subunit D.	RNA polymerase II subunit E.	0.999
LOC103391314	Polr1c	ENSCSEP00000028542	ENSCSEP00000028317	RNA polymerase I and III subunit D.	RNA polymerase I and III subunit C.	0.999
LOC103391314	cd3eap	ENSCSEP00000028542	ENSCSEP00000009212	RNA polymerase I and III subunit D.	CD3e molecule, epsilon associated protein.	0.996
LOC103391314	polr1a	ENSCSEP00000028542	ENSCSEP00000031564	RNA polymerase I and III subunit D.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
LOC103391314	polr1b	ENSCSEP00000028542	ENSCSEP00000013295	RNA polymerase I and III subunit D.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.995
LOC103391314	polr1e	ENSCSEP00000028542	ENSCSEP00000007963	RNA polymerase I and III subunit D.	RNA polymerase I subunit E.	0.988
LOC103391314	polr2f	ENSCSEP00000028542	ENSCSEP00000010669	RNA polymerase I and III subunit D.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.999
LOC103391314	polr2h	ENSCSEP00000028542	ENSCSEP00000023951	RNA polymerase I and III subunit D.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
LOC103391314	polr2k	ENSCSEP00000028542	ENSCSEP00000027187	RNA polymerase I and III subunit D.	Polymerase (RNA) II (DNA directed) polypeptide K.	0.998
LOC103391314	polr2l	ENSCSEP00000028542	ENSCSEP00000002979	RNA polymerase I and III subunit D.	Polymerase (RNA) II (DNA directed) polypeptide L.	0.999
LOC103391314	twistnb	ENSCSEP00000028542	ENSCSEP00000013971	RNA polymerase I and III subunit D.	SHS2_Rpb7-N domain-containing protein.	0.998
LOC103391314	znrd1	ENSCSEP00000028542	ENSCSEP00000009863	RNA polymerase I and III subunit D.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
POLR2E	LOC103391314	ENSCSEP00000011072	ENSCSEP00000028542	RNA polymerase II subunit E.	RNA polymerase I and III subunit D.	0.999
POLR2E	Polr1c	ENSCSEP00000011072	ENSCSEP00000028317	RNA polymerase II subunit E.	RNA polymerase I and III subunit C.	0.999
POLR2E	cd3eap	ENSCSEP00000011072	ENSCSEP00000009212	RNA polymerase II subunit E.	CD3e molecule, epsilon associated protein.	0.996
POLR2E	polr1a	ENSCSEP00000011072	ENSCSEP00000031564	RNA polymerase II subunit E.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
POLR2E	polr1b	ENSCSEP00000011072	ENSCSEP00000013295	RNA polymerase II subunit E.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
POLR2E	polr1e	ENSCSEP00000011072	ENSCSEP00000007963	RNA polymerase II subunit E.	RNA polymerase I subunit E.	0.999
POLR2E	polr2f	ENSCSEP00000011072	ENSCSEP00000010669	RNA polymerase II subunit E.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.999
POLR2E	polr2h	ENSCSEP00000011072	ENSCSEP00000023951	RNA polymerase II subunit E.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999