STRINGSTRING
LOC103389252 LOC103389252 pabpn1l pabpn1l LOC103385776 LOC103385776 SRSF3 SRSF3 LOC103391595 LOC103391595 LOC103381207 LOC103381207 nxf1 nxf1 Srsf7 Srsf7 LOC103399099 LOC103399099 srsf10 srsf10 pabpn1 pabpn1 zrsr2 zrsr2 ENSCSEP00000015502 ENSCSEP00000015502 LOC103393948 LOC103393948 tra2b tra2b tra2a tra2a srsf2 srsf2 ENSCSEP00000022068 ENSCSEP00000022068 LOC103378294 LOC103378294 LOC103390134 LOC103390134 LOC103393202 LOC103393202 ENSCSEP00000030885 ENSCSEP00000030885 Srsf6 Srsf6 LOC103392513 LOC103392513
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103389252Uncharacterized protein. (227 aa)
pabpn1lEPABP2. (260 aa)
LOC103385776RRM domain-containing protein. (168 aa)
SRSF3Serine and arginine rich splicing factor 3. (204 aa)
LOC103391595U2 small nuclear RNA auxiliary factor 1. (212 aa)
LOC103381207Serine and arginine rich splicing factor 5b. (314 aa)
nxf1Zgc:153681. (651 aa)
Srsf7Serine and arginine rich splicing factor 7a. (140 aa)
LOC103399099RRM domain-containing protein. (102 aa)
srsf10RRM domain-containing protein. (298 aa)
pabpn1Poly(A) binding protein, nuclear 1. (305 aa)
zrsr2Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2. (874 aa)
ENSCSEP00000015502Uncharacterized protein. (262 aa)
LOC103393948Serine and arginine rich splicing factor 4. (360 aa)
tra2bTransformer 2 beta homolog. (268 aa)
tra2aTransformer 2 alpha homolog. (301 aa)
srsf2Serine and arginine rich splicing factor 2a. (217 aa)
ENSCSEP00000022068Uncharacterized protein. (244 aa)
LOC103378294Serine and arginine rich splicing factor 1a. (250 aa)
LOC103390134Serine and arginine rich splicing factor 9. (250 aa)
LOC103393202Aly/REF export factor. (270 aa)
ENSCSEP00000030885Serine and arginine rich splicing factor 6. (133 aa)
Srsf6Serine and arginine rich splicing factor 6. (238 aa)
LOC103392513U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (491 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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