STRINGSTRING
LOC103380525 LOC103380525 LOC103389253 LOC103389253 LOC103391608 LOC103391608 shmt1 shmt1 psat1 psat1 LOC103376812 LOC103376812 psph psph ENSCSEP00000016415 ENSCSEP00000016415 shmt2 shmt2 phgdh phgdh LOC103382935 LOC103382935 LOC103396059 LOC103396059 SDS SDS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103380525Serine dehydratase-like. (328 aa)
LOC103389253Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (584 aa)
LOC103391608Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (565 aa)
shmt1Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (466 aa)
psat1Phosphoserine aminotransferase. (489 aa)
LOC103376812Serine--pyruvate aminotransferase. (391 aa)
psphPhosphoserine phosphatase. (273 aa)
ENSCSEP00000016415PALP domain-containing protein. (504 aa)
shmt2Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (501 aa)
phgdhD-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (529 aa)
LOC103382935Si:ch73-263o4.3. (320 aa)
LOC103396059Serine--pyruvate aminotransferase. (425 aa)
SDSSerine dehydratase. (219 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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