STRINGSTRING
LOC103389688 LOC103389688 tpk1 tpk1 mmachc mmachc shmt1 shmt1 mmaa mmaa Mtr Mtr LOC103387811 LOC103387811 mmab mmab LOC103384179 LOC103384179 gsto1 gsto1 mmadhc mmadhc rfk rfk rgn rgn pnpo pnpo LOC103392303 LOC103392303 abcd4 abcd4 LOC103398654 LOC103398654 ENSCSEP00000020900 ENSCSEP00000020900 ENSCSEP00000020680 ENSCSEP00000020680 shmt2 shmt2 amn amn ENSCSEP00000016629 ENSCSEP00000016629 gclc gclc thtpa thtpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103389688Zgc:92335. (376 aa)
tpk1Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family. (250 aa)
mmachcMetabolism of cobalamin associated C. (263 aa)
shmt1Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (466 aa)
mmaaMetabolism of cobalamin associated A. (428 aa)
MtrMethionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1235 aa)
LOC103387811Pyridoxal (pyridoxine, vitamin B6) kinase b. (307 aa)
mmabCorrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (231 aa)
LOC103384179Zgc:101765. (294 aa)
gsto1Glutathione S-transferase omega 2; Belongs to the GST superfamily. (240 aa)
mmadhcMetabolism of cobalamin associated D. (297 aa)
rfkRiboflavin kinase. (169 aa)
rgnRegucalcin. (299 aa)
pnpoPyridoxamine 5'-phosphate oxidase. (280 aa)
LOC103392303Pyridoxal (pyridoxine, vitamin B6) kinase a. (311 aa)
abcd4ATP-binding cassette, sub-family D (ALD), member 4. (628 aa)
LOC103398654DUF4430 domain-containing protein. (426 aa)
ENSCSEP00000020900Flavokinase domain-containing protein. (144 aa)
ENSCSEP00000020680Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (195 aa)
shmt2Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (501 aa)
amnAmnion associated transmembrane protein. (474 aa)
ENSCSEP000000166295-methyltetrahydrofolate-homocysteine methyltransferase reductase. (670 aa)
gclcGlutamate-cysteine ligase, catalytic subunit. (630 aa)
thtpaThiamine triphosphatase. (226 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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