(4 nodes) CCAAT-binding factor complex network (Cynoglossus semilaevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nfya	Nuclear transcription factor Y, alpha, like. (354 aa)
	cebpz	CCAAT enhancer binding protein zeta. (1020 aa)
	nfyc	Nuclear transcription factor Y, gamma. (345 aa)
	nfyb	Nuclear transcription factor Y, beta a. (203 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cebpz	nfya	ENSCSEP00000008849	ENSCSEP00000006354	CCAAT enhancer binding protein zeta.	Nuclear transcription factor Y, alpha, like.	0.439
cebpz	nfyb	ENSCSEP00000008849	ENSCSEP00000005062	CCAAT enhancer binding protein zeta.	Nuclear transcription factor Y, beta a.	0.498
cebpz	nfyc	ENSCSEP00000008849	ENSCSEP00000026937	CCAAT enhancer binding protein zeta.	Nuclear transcription factor Y, gamma.	0.487
nfya	cebpz	ENSCSEP00000006354	ENSCSEP00000008849	Nuclear transcription factor Y, alpha, like.	CCAAT enhancer binding protein zeta.	0.439
nfya	nfyb	ENSCSEP00000006354	ENSCSEP00000005062	Nuclear transcription factor Y, alpha, like.	Nuclear transcription factor Y, beta a.	0.998
nfya	nfyc	ENSCSEP00000006354	ENSCSEP00000026937	Nuclear transcription factor Y, alpha, like.	Nuclear transcription factor Y, gamma.	0.997
nfyb	cebpz	ENSCSEP00000005062	ENSCSEP00000008849	Nuclear transcription factor Y, beta a.	CCAAT enhancer binding protein zeta.	0.498
nfyb	nfya	ENSCSEP00000005062	ENSCSEP00000006354	Nuclear transcription factor Y, beta a.	Nuclear transcription factor Y, alpha, like.	0.998
nfyb	nfyc	ENSCSEP00000005062	ENSCSEP00000026937	Nuclear transcription factor Y, beta a.	Nuclear transcription factor Y, gamma.	0.997
nfyc	cebpz	ENSCSEP00000026937	ENSCSEP00000008849	Nuclear transcription factor Y, gamma.	CCAAT enhancer binding protein zeta.	0.487
nfyc	nfya	ENSCSEP00000026937	ENSCSEP00000006354	Nuclear transcription factor Y, gamma.	Nuclear transcription factor Y, alpha, like.	0.997
nfyc	nfyb	ENSCSEP00000026937	ENSCSEP00000005062	Nuclear transcription factor Y, gamma.	Nuclear transcription factor Y, beta a.	0.997