174 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	iqub	IQ motif and ubiquitin domain containing. (799 aa)
	SPAM1-2	Hyaluronidase. (444 aa)
	LOC103382288	Uncharacterized protein. (525 aa)
	gal	Galanin/GMAP prepropeptide. (142 aa)
	cep131	Centrosomal protein 131. (1299 aa)
	LOC103384571	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (211 aa)
	LOC103383379	GTP binding protein 2b. (620 aa)
	rab4a	RAB4a, member RAS oncogene family. (213 aa)
	LOC103385743	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (188 aa)
	OLFM4	Olfactomedin 4. (457 aa)
	LOC103376718	Si:ch211-173a9.6. (493 aa)
	ptprn2	Protein tyrosine phosphatase receptor type N2. (943 aa)
	gtpbp2	Tr-type G domain-containing protein. (616 aa)
	LOC103389235	Uncharacterized protein. (968 aa)
	bmf	Bcl2 modifying factor. (173 aa)
	LOC103393533	Thrombospondin 1a. (1173 aa)
	scg5	Secretogranin V. (230 aa)
	knl1	Knl1_RWD_C domain-containing protein. (1569 aa)
	ENSCSEP00000004956	Uncharacterized protein. (860 aa)
	ift20	Intraflagellar transport 20 homolog (Chlamydomonas). (134 aa)
	stxbp5	Syntaxin binding protein 5a (tomosyn). (1094 aa)
	RAB37	RAB37, member RAS oncogene family. (234 aa)
	bsg	Basigin. (390 aa)
	cbarp	CACN subunit beta associated regulatory protein b. (903 aa)
	rab13	RAB13, member RAS oncogene family. (203 aa)
	ENSCSEP00000003207	Lysosomal-associated membrane protein 2. (452 aa)
	LOC103381019	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (251 aa)
	ENSCSEP00000003001	Uncharacterized protein. (73 aa)
	ENSCSEP00000002996	Synaptotagmin VIIb. (497 aa)
	ENSCSEP00000002766	Metalloendopeptidase. (265 aa)
	serpini1	Serpin peptidase inhibitor, clade I (neuroserpin), member 1; Belongs to the serpin family. (460 aa)
	LOC103390475	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (872 aa)
	ENSCSEP00000002478	Uncharacterized protein. (506 aa)
	SYT8	Synaptotagmin 8. (347 aa)
	dld	Dihydrolipoyl dehydrogenase. (508 aa)
	LOC103379872	Hyaluronidase. (491 aa)
	hyal1	Hyaluronidase. (540 aa)
	LOC103385592	MFS domain-containing protein. (461 aa)
	syt9	Synaptotagmin IXb. (527 aa)
	ENSCSEP00000033476	Tyrosine-protein phosphatase domain-containing protein. (93 aa)
	ENSCSEP00000033449	Synaptotagmin Ib. (352 aa)
	cav1	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (181 aa)
	trh	Thyrotropin-releasing hormone. (276 aa)
	nudt1	Nudix (nucleoside diphosphate linked moiety X)-type motif 1; Belongs to the Nudix hydrolase family. (169 aa)
	LOC103379527	Metalloendopeptidase. (294 aa)
	penk	Uncharacterized protein. (243 aa)
	LOC103380837	Uncharacterized protein. (238 aa)
	LOC103380831	Monooxygenase, DBH-like 1, like. (468 aa)
	Stbd1	CBM20 domain-containing protein. (562 aa)
	ENSCSEP00000031603	Uncharacterized protein. (237 aa)
	scfd2	Sec1 family domain containing 2; Belongs to the STXBP/unc-18/SEC1 family. (691 aa)
	ENSCSEP00000031249	Metalloendopeptidase. (260 aa)
	cfap65	Uncharacterized protein. (1586 aa)
	vegfa	Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (214 aa)
	stxbp3	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (591 aa)
	LOC103382006	Uncharacterized protein. (411 aa)
	ENSCSEP00000030129	Chromogranin A. (274 aa)
	ATP6V1A	ATPase H+ transporting V1 subunit A. (617 aa)
	pam	Peptidylglycine alpha-amidating monooxygenase. (1604 aa)
	LOC103397608	Uncharacterized protein. (218 aa)
	enkur	Enkurin, TRPC channel interacting protein. (257 aa)
	ENSCSEP00000029443	Uncharacterized protein. (54 aa)
	Rab27a	RAB27A, member RAS oncogene family. (159 aa)
	LOC103397625	Corticotropin-releasing factor-binding protein; Binds CRF and inactivates it. May prevent inappropriate pituitary-adrenal stimulation in pregnancy. Belongs to the CRF-binding protein family. (347 aa)
	ENSCSEP00000029234	Inositol 1,4,5-trisphosphate receptor, type 3. (2535 aa)
	LOC103397627	Secretory carrier-associated membrane protein. (342 aa)
	LOC103384430	Solute carrier family 17 member 9b. (466 aa)
	ENSCSEP00000028762	Synaptotagmin IIa. (430 aa)
	spaca6	Uncharacterized protein. (334 aa)
	LOC103393769	POMC-b. (178 aa)
	ENSCSEP00000027967	FYVE_2 domain-containing protein. (141 aa)
	LOC103397660	Oxytocin; Belongs to the vasopressin/oxytocin family. (156 aa)
	LOC103393210	Uncharacterized protein. (229 aa)
	LOC103377215	Glycyl-tRNA synthetase. (750 aa)
	LOC103377216	Glycyl-tRNA synthetase. (647 aa)
	ENSCSEP00000026975	Ins145_P3_rec domain-containing protein. (228 aa)
	ENSCSEP00000026957	Uncharacterized protein. (2532 aa)
	rab2a	RAB2A, member RAS oncogene family. (212 aa)
	ENSCSEP00000026930	Uncharacterized protein. (205 aa)
	Stxbp1	Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family. (602 aa)
	cd46	Uncharacterized protein. (340 aa)
	ENSCSEP00000026528	V-SNARE coiled-coil homology domain-containing protein. (97 aa)
	rab12	RAB12, member RAS oncogene family. (243 aa)
	atp6v1a	ATPase H+ transporting V1 subunit A. (617 aa)
	LOC103378440	Uncharacterized protein; Belongs to the peptidase S1 family. (438 aa)
	dbh	Dopamine beta-hydroxylase (dopamine beta-monooxygenase). (590 aa)
	SYT2	Synaptotagmin 2. (429 aa)
	ENSCSEP00000025082	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (255 aa)
	ENSCSEP00000025064	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (420 aa)
	spx	Spexin hormone. (112 aa)
	tbxa2r	Thromboxane A2 receptor. (365 aa)
	LOC103396004	Secretogranin II (chromogranin C), b. (601 aa)
	LOC103383284-2	RAB11 family interacting protein 5a (class I). (1263 aa)
	Vps13a	Vacuolar protein sorting 13 homolog A. (2977 aa)
	snapin	SNAP associated protein. (129 aa)
	ica1	Islet cell autoantigen 1. (475 aa)
	LOC103379169	Synaptotagmin IXa. (563 aa)
	LOC103393008	Uncharacterized protein. (252 aa)
	ENSCSEP00000022717	Metalloendopeptidase. (405 aa)
	ENSCSEP00000022578	Uncharacterized protein. (1073 aa)
	POMC	Proopiomelanocortin. (213 aa)
	ENSCSEP00000022026	Uncharacterized protein. (105 aa)
	LOC103397214	Uncharacterized protein. (228 aa)
	tekt3	Tektin 3. (482 aa)
	ENSCSEP00000021858	Metalloendopeptidase. (292 aa)
	ENSCSEP00000021833	Metalloendopeptidase. (260 aa)
	crhbp	Corticotropin releasing hormone binding protein. (360 aa)
	ctsh	Cathepsin H; Belongs to the peptidase C1 family. (325 aa)
	LOC103397425	Vesicle-associated membrane protein 8 (endobrevin). (122 aa)
	LOC103393598	Cytochrome b561. (252 aa)
	SCAMP1	Secretory carrier-associated membrane protein. (304 aa)
	hexb	Beta-hexosaminidase. (554 aa)
	pcsk1	Proprotein convertase subtilisin/kexin type 1; Belongs to the peptidase S8 family. (784 aa)
	Scg3	Secretogranin III. (448 aa)
	ENSCSEP00000019354	Uncharacterized protein. (477 aa)
	ENSCSEP00000019335	Si:ch73-81k8.2. (225 aa)
	c20h1orf35	Zgc:63882. (298 aa)
	tmed2	Transmembrane p24 trafficking protein 2. (201 aa)
	LOC103398615	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (833 aa)
	stxbp2	Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family. (629 aa)
	ENSCSEP00000018205	Metalloendopeptidase. (308 aa)
	LOC103389894	Protein S100; Belongs to the S-100 family. (98 aa)
	ENSCSEP00000017782	Uncharacterized protein. (79 aa)
	myrip	Myosin VIIA and Rab interacting protein. (853 aa)
	ENSCSEP00000017533	RabBD domain-containing protein. (138 aa)
	ENSCSEP00000017327	Uncharacterized protein. (1079 aa)
	baiap2	BAI1-associated protein 2a. (693 aa)
	LOC103392078	Protein tyrosine phosphatase receptor type Na. (955 aa)
	ENSCSEP00000017038	HPS4 biogenesis of lysosomal organelles complex 3 subunit 2. (563 aa)
	tcirg1	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (809 aa)
	ENSCSEP00000015864	Metalloendopeptidase. (266 aa)
	scube2	Signal peptide, CUB domain, EGF-like 2. (979 aa)
	ENSCSEP00000014870	Uncharacterized protein. (346 aa)
	ENSCSEP00000014591	Metalloendopeptidase. (232 aa)
	ebag9	Estrogen receptor binding site associated antigen 9; May participate in suppression of cell proliferation and induces apoptotic cell death through activation of interleukin-1-beta converting enzyme (ICE)-like proteases. (213 aa)
	ENSCSEP00000014522	Metalloendopeptidase. (287 aa)
	ENSCSEP00000014442	Metalloendopeptidase. (259 aa)
	LOC103398457	Metalloendopeptidase. (255 aa)
	LOC103398456	Metalloendopeptidase. (298 aa)
	pla1a	Phospholipase A1 member A. (463 aa)
	SPATA1	Spermatogenesis associated 1. (291 aa)
	LOC103396960	Secretory carrier-associated membrane protein. (327 aa)
	VPS13B	Vacuolar protein sorting 13 homolog B. (3888 aa)
	Trip11	Thyroid hormone receptor interactor 11. (1981 aa)
	ENSCSEP00000013320	Metalloendopeptidase. (270 aa)
	ENSCSEP00000013264	Metalloendopeptidase. (275 aa)
	ENSCSEP00000013208	Metalloendopeptidase. (259 aa)
	ENSCSEP00000013023	Uncharacterized protein. (154 aa)
	LOC103380290	Coiled-coil domain containing 136b. (449 aa)
	LOC103378089	RAB4B, member RAS oncogene family. (236 aa)
	cfp	Uncharacterized protein. (563 aa)
	gmfb	Glia maturation factor; Belongs to the actin-binding proteins ADF family. GMF subfamily. (143 aa)
	lrguk	Leucine-rich repeats and guanylate kinase domain containing. (714 aa)
	spag6	Sperm associated antigen 6. (511 aa)
	LOC103380297	Synaptotagmin VIIa. (571 aa)
	LOC103378956	Metalloendopeptidase. (272 aa)
	LOC103378955	Metalloendopeptidase. (294 aa)
	ENSCSEP00000010973	Metalloendopeptidase. (225 aa)
	wfs1	Wolfram syndrome 1b (wolframin). (972 aa)
	thbs2	Thrombospondin 2a. (1185 aa)
	LOC103383729	Wolfram syndrome 1a (wolframin). (892 aa)
	itpr2	Inositol 1,4,5-trisphosphate receptor, type 2. (2652 aa)
	fgb	Fibrinogen beta chain. (495 aa)
	scg2	Uncharacterized protein. (554 aa)
	serpine2	Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2; Belongs to the serpin family. (396 aa)
	snap23	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (215 aa)
	vamp3	V-SNARE coiled-coil homology domain-containing protein. (117 aa)
	syt1	Synaptotagmin Ia. (452 aa)
	Ica1l	Islet cell autoantigen 1-like. (595 aa)
	ecrg4	ECRG4 augurin precursor b. (190 aa)
	ENSCSEP00000005944	Thrombospondin 1b. (1152 aa)
	LOC103379448	Syntaxin binding protein 5b (tomosyn). (1188 aa)
	ENSCSEP00000005773	Coiled-coil domain containing 136b. (294 aa)
	ITPR1	Inositol 1,4,5-trisphosphate receptor type 1. (2721 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP6V1A	ENSCSEP00000025064	ENSCSEP00000029825	ENSCSEP00000025064	ATPase H+ transporting V1 subunit A.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.888
ATP6V1A	ENSCSEP00000025082	ENSCSEP00000029825	ENSCSEP00000025082	ATPase H+ transporting V1 subunit A.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.888
ATP6V1A	LOC103390475	ENSCSEP00000029825	ENSCSEP00000002576	ATPase H+ transporting V1 subunit A.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.888
ATP6V1A	LOC103398615	ENSCSEP00000029825	ENSCSEP00000018960	ATPase H+ transporting V1 subunit A.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.888
ATP6V1A	atp6v1a	ENSCSEP00000029825	ENSCSEP00000026312	ATPase H+ transporting V1 subunit A.	ATPase H+ transporting V1 subunit A.	0.900
ATP6V1A	tcirg1	ENSCSEP00000029825	ENSCSEP00000016135	ATPase H+ transporting V1 subunit A.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.888
ENSCSEP00000002478	ENSCSEP00000014870	ENSCSEP00000002478	ENSCSEP00000014870	Uncharacterized protein.	Uncharacterized protein.	0.618
ENSCSEP00000002478	lrguk	ENSCSEP00000002478	ENSCSEP00000012193	Uncharacterized protein.	Leucine-rich repeats and guanylate kinase domain containing.	0.478
ENSCSEP00000002996	snap23	ENSCSEP00000002996	ENSCSEP00000007790	Synaptotagmin VIIb.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.519
ENSCSEP00000003001	snap23	ENSCSEP00000003001	ENSCSEP00000007790	Uncharacterized protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.519
ENSCSEP00000004956	VPS13B	ENSCSEP00000004956	ENSCSEP00000013863	Uncharacterized protein.	Vacuolar protein sorting 13 homolog B.	0.419
ENSCSEP00000005944	LOC103393533	ENSCSEP00000005944	ENSCSEP00000000283	Thrombospondin 1b.	Thrombospondin 1a.	0.901
ENSCSEP00000014870	ENSCSEP00000002478	ENSCSEP00000014870	ENSCSEP00000002478	Uncharacterized protein.	Uncharacterized protein.	0.618
ENSCSEP00000014870	ENSCSEP00000019335	ENSCSEP00000014870	ENSCSEP00000019335	Uncharacterized protein.	Si:ch73-81k8.2.	0.704
ENSCSEP00000014870	ENSCSEP00000019354	ENSCSEP00000014870	ENSCSEP00000019354	Uncharacterized protein.	Uncharacterized protein.	0.618
ENSCSEP00000014870	ift20	ENSCSEP00000014870	ENSCSEP00000004701	Uncharacterized protein.	Intraflagellar transport 20 homolog (Chlamydomonas).	0.456
ENSCSEP00000014870	lrguk	ENSCSEP00000014870	ENSCSEP00000012193	Uncharacterized protein.	Leucine-rich repeats and guanylate kinase domain containing.	0.826
ENSCSEP00000014870	spag6	ENSCSEP00000014870	ENSCSEP00000012075	Uncharacterized protein.	Sperm associated antigen 6.	0.618
ENSCSEP00000017327	knl1	ENSCSEP00000017327	ENSCSEP00000005506	Uncharacterized protein.	Knl1_RWD_C domain-containing protein.	0.922
ENSCSEP00000017533	ENSCSEP00000026930	ENSCSEP00000017533	ENSCSEP00000026930	RabBD domain-containing protein.	Uncharacterized protein.	0.462