26 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103378070	Rab interacting lysosomal protein. (416 aa)
	LOC103380297	Synaptotagmin VIIa. (571 aa)
	pip4p1	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (267 aa)
	LOC103386743	RAB22A, member RAS oncogene family. (194 aa)
	LOC103395521	RAB38c, member of RAS oncogene family. (208 aa)
	Inpp5b	Inositol polyphosphate-5-phosphatase B. (591 aa)
	ENSCSEP00000029726	INPP5B_PH domain-containing protein. (236 aa)
	vamp7	Synaptobrevin-like 1; Belongs to the synaptobrevin family. (219 aa)
	LOC103384476	Zgc:162171. (364 aa)
	pip4p2	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (282 aa)
	LOC103395386	RAB38b, member of RAS oncogene family. (218 aa)
	LOC103378644	Lysosomal associated membrane protein 1. (370 aa)
	ENSCSEP00000002996	Synaptotagmin VIIb. (497 aa)
	ENSCSEP00000003001	Uncharacterized protein. (73 aa)
	ENSCSEP00000003207	Lysosomal-associated membrane protein 2. (452 aa)
	ocrl	OCRL inositol polyphosphate-5-phosphatase. (981 aa)
	rab32	RAB32a, member RAS oncogene family. (314 aa)
	RAB7A	RAB7A, member RAS oncogene family. (236 aa)
	pikfyve	Phosphoinositide kinase, FYVE finger containing. (2060 aa)
	LOC103388924	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (263 aa)
	LOC103389533	Uncharacterized protein. (320 aa)
	LOC103386171	RAB7a, member RAS oncogene family. (207 aa)
	RAB31	RAB31, member RAS oncogene family. (195 aa)
	ENSCSEP00000022711	RAB9B, member RAS oncogene family. (220 aa)
	RAB9A	RAB9A, member RAS oncogene family. (213 aa)
	LOC103388693	Toll-like receptor 18; Belongs to the Toll-like receptor family. (898 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000002996	vamp7	ENSCSEP00000002996	ENSCSEP00000028553	Synaptotagmin VIIb.	Synaptobrevin-like 1; Belongs to the synaptobrevin family.	0.559
ENSCSEP00000003001	vamp7	ENSCSEP00000003001	ENSCSEP00000028553	Uncharacterized protein.	Synaptobrevin-like 1; Belongs to the synaptobrevin family.	0.559
ENSCSEP00000003207	LOC103378644	ENSCSEP00000003207	ENSCSEP00000000736	Lysosomal-associated membrane protein 2.	Lysosomal associated membrane protein 1.	0.923
ENSCSEP00000022711	LOC103386743	ENSCSEP00000022711	ENSCSEP00000030929	RAB9B, member RAS oncogene family.	RAB22A, member RAS oncogene family.	0.473
ENSCSEP00000022711	LOC103389533	ENSCSEP00000022711	ENSCSEP00000008255	RAB9B, member RAS oncogene family.	Uncharacterized protein.	0.906
ENSCSEP00000022711	RAB31	ENSCSEP00000022711	ENSCSEP00000026208	RAB9B, member RAS oncogene family.	RAB31, member RAS oncogene family.	0.469
ENSCSEP00000022711	RAB9A	ENSCSEP00000022711	ENSCSEP00000015758	RAB9B, member RAS oncogene family.	RAB9A, member RAS oncogene family.	0.906
ENSCSEP00000029726	Inpp5b	ENSCSEP00000029726	ENSCSEP00000029743	INPP5B_PH domain-containing protein.	Inositol polyphosphate-5-phosphatase B.	0.623
Inpp5b	ENSCSEP00000029726	ENSCSEP00000029743	ENSCSEP00000029726	Inositol polyphosphate-5-phosphatase B.	INPP5B_PH domain-containing protein.	0.623
Inpp5b	LOC103388924	ENSCSEP00000029743	ENSCSEP00000007827	Inositol polyphosphate-5-phosphatase B.	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.900
Inpp5b	ocrl	ENSCSEP00000029743	ENSCSEP00000004300	Inositol polyphosphate-5-phosphatase B.	OCRL inositol polyphosphate-5-phosphatase.	0.903
Inpp5b	pip4p2	ENSCSEP00000029743	ENSCSEP00000027900	Inositol polyphosphate-5-phosphatase B.	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.900
LOC103378070	LOC103386171	ENSCSEP00000012226	ENSCSEP00000008381	Rab interacting lysosomal protein.	RAB7a, member RAS oncogene family.	0.731
LOC103378070	RAB7A	ENSCSEP00000012226	ENSCSEP00000004567	Rab interacting lysosomal protein.	RAB7A, member RAS oncogene family.	0.731
LOC103378644	ENSCSEP00000003207	ENSCSEP00000000736	ENSCSEP00000003207	Lysosomal associated membrane protein 1.	Lysosomal-associated membrane protein 2.	0.923
LOC103378644	LOC103386171	ENSCSEP00000000736	ENSCSEP00000008381	Lysosomal associated membrane protein 1.	RAB7a, member RAS oncogene family.	0.453
LOC103378644	RAB7A	ENSCSEP00000000736	ENSCSEP00000004567	Lysosomal associated membrane protein 1.	RAB7A, member RAS oncogene family.	0.453
LOC103378644	vamp7	ENSCSEP00000000736	ENSCSEP00000028553	Lysosomal associated membrane protein 1.	Synaptobrevin-like 1; Belongs to the synaptobrevin family.	0.432
LOC103380297	vamp7	ENSCSEP00000012020	ENSCSEP00000028553	Synaptotagmin VIIa.	Synaptobrevin-like 1; Belongs to the synaptobrevin family.	0.559
LOC103386171	LOC103378070	ENSCSEP00000008381	ENSCSEP00000012226	RAB7a, member RAS oncogene family.	Rab interacting lysosomal protein.	0.731