13 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSCSEP00000013672	Selenoprotein S. (145 aa)
	derl2	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (239 aa)
	derl1	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (254 aa)
	LOC103397105	Uncharacterized protein; Belongs to the AAA ATPase family. (806 aa)
	LOC103398999	Ubiquitin recognition factor in ER associated degradation 1. (311 aa)
	faf2	Fas associated factor family member 2. (501 aa)
	sel1l	SEL1L adaptor subunit of ERAD E3 ubiquitin ligase. (858 aa)
	LOC103398200	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	ufd1	Uncharacterized protein. (297 aa)
	hm13	Histocompatibility (minor) 13. (383 aa)
	sec61b	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (94 aa)
	rhbdd1	Rhomboid domain containing 1. (313 aa)
	hsp90b1	Heat shock protein 90, beta (grp94), member 1. (810 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000013672	LOC103397105	ENSCSEP00000013672	ENSCSEP00000018351	Selenoprotein S.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.938
ENSCSEP00000013672	LOC103398200	ENSCSEP00000013672	ENSCSEP00000021019	Selenoprotein S.	Valosin containing protein; Belongs to the AAA ATPase family.	0.938
ENSCSEP00000013672	derl1	ENSCSEP00000013672	ENSCSEP00000017906	Selenoprotein S.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.924
ENSCSEP00000013672	derl2	ENSCSEP00000013672	ENSCSEP00000014619	Selenoprotein S.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.838
ENSCSEP00000013672	faf2	ENSCSEP00000013672	ENSCSEP00000031493	Selenoprotein S.	Fas associated factor family member 2.	0.590
ENSCSEP00000013672	sel1l	ENSCSEP00000013672	ENSCSEP00000030105	Selenoprotein S.	SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.	0.554
LOC103397105	ENSCSEP00000013672	ENSCSEP00000018351	ENSCSEP00000013672	Uncharacterized protein; Belongs to the AAA ATPase family.	Selenoprotein S.	0.938
LOC103397105	LOC103398200	ENSCSEP00000018351	ENSCSEP00000021019	Uncharacterized protein; Belongs to the AAA ATPase family.	Valosin containing protein; Belongs to the AAA ATPase family.	0.900
LOC103397105	LOC103398999	ENSCSEP00000018351	ENSCSEP00000029964	Uncharacterized protein; Belongs to the AAA ATPase family.	Ubiquitin recognition factor in ER associated degradation 1.	0.929
LOC103397105	derl1	ENSCSEP00000018351	ENSCSEP00000017906	Uncharacterized protein; Belongs to the AAA ATPase family.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.956
LOC103397105	derl2	ENSCSEP00000018351	ENSCSEP00000014619	Uncharacterized protein; Belongs to the AAA ATPase family.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.935
LOC103397105	faf2	ENSCSEP00000018351	ENSCSEP00000031493	Uncharacterized protein; Belongs to the AAA ATPase family.	Fas associated factor family member 2.	0.943
LOC103397105	hsp90b1	ENSCSEP00000018351	ENSCSEP00000012787	Uncharacterized protein; Belongs to the AAA ATPase family.	Heat shock protein 90, beta (grp94), member 1.	0.490
LOC103397105	rhbdd1	ENSCSEP00000018351	ENSCSEP00000009116	Uncharacterized protein; Belongs to the AAA ATPase family.	Rhomboid domain containing 1.	0.849
LOC103397105	sel1l	ENSCSEP00000018351	ENSCSEP00000030105	Uncharacterized protein; Belongs to the AAA ATPase family.	SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.	0.882
LOC103397105	ufd1	ENSCSEP00000018351	ENSCSEP00000030841	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.929
LOC103398200	ENSCSEP00000013672	ENSCSEP00000021019	ENSCSEP00000013672	Valosin containing protein; Belongs to the AAA ATPase family.	Selenoprotein S.	0.938
LOC103398200	LOC103397105	ENSCSEP00000021019	ENSCSEP00000018351	Valosin containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.900
LOC103398200	LOC103398999	ENSCSEP00000021019	ENSCSEP00000029964	Valosin containing protein; Belongs to the AAA ATPase family.	Ubiquitin recognition factor in ER associated degradation 1.	0.929
LOC103398200	derl1	ENSCSEP00000021019	ENSCSEP00000017906	Valosin containing protein; Belongs to the AAA ATPase family.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.956