37 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mcrs1	Microspherule protein 1. (479 aa)
	LOC103379738	Uncharacterized protein. (550 aa)
	Pot1	Telo_bind domain-containing protein. (323 aa)
	uchl5	Ubiquitin carboxyl-terminal hydrolase. (334 aa)
	Atm	Non-specific serine/threonine protein kinase. (3052 aa)
	ino80d	INO80 complex subunit Da. (974 aa)
	map2k7	Mitogen-activated protein kinase kinase 7. (423 aa)
	tfpt	TCF3 (E2A) fusion partner. (199 aa)
	atr	ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2429 aa)
	nek2	NIMA-related kinase 2. (440 aa)
	ino80e	INO80 complex subunit E. (231 aa)
	ino80	INO80 complex ATPase subunit. (1453 aa)
	ppp1r10	Protein phosphatase 1, regulatory subunit 10. (773 aa)
	cct2	Chaperonin containing TCP1, subunit 2 (beta). (530 aa)
	LOC103397646	MAPK activated protein kinase 5. (471 aa)
	cct3	T-complex protein 1 subunit gamma. (499 aa)
	fbxo4	F-box protein 4. (422 aa)
	ENSCSEP00000023562	ATRX chromatin remodeler. (1862 aa)
	rad50	RAD50 homolog, double strand break repair protein. (1319 aa)
	LOC103378278	Polynucleotide kinase 3'-phosphatase. (591 aa)
	LOC103391605	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (281 aa)
	sirt6	Sirtuin 6. (351 aa)
	LOC103394195	Zgc:91944. (470 aa)
	dhx36	DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1069 aa)
	dkc1	Dyskeratosis congenita 1, dyskerin. (471 aa)
	ENSCSEP00000018388	Uncharacterized protein. (232 aa)
	ENSCSEP00000017527	ANK_REP_REGION domain-containing protein. (135 aa)
	LOC103398090	Poly [ADP-ribose] polymerase. (1077 aa)
	LOC103383875	Uncharacterized protein. (468 aa)
	xrcc5	X-ray repair complementing defective repair in Chinese hamster cells 5. (736 aa)
	ENSCSEP00000016664	Chaperonin containing TCP1, subunit 5 (epsilon). (486 aa)
	ercc1	Excision repair cross-complementation group 1. (359 aa)
	nfrkb	Nuclear factor related to kappaB binding protein. (1221 aa)
	LOC103396963	Protein kinase domain-containing protein. (456 aa)
	ENSCSEP00000012171	ANK_REP_REGION domain-containing protein. (146 aa)
	map3k4	Mitogen-activated protein kinase kinase kinase 4. (1583 aa)
	LOC103389484	Poly [ADP-ribose] polymerase. (1289 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Atm	ENSCSEP00000018388	ENSCSEP00000003106	ENSCSEP00000018388	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.716
Atm	ENSCSEP00000023562	ENSCSEP00000003106	ENSCSEP00000023562	Non-specific serine/threonine protein kinase.	ATRX chromatin remodeler.	0.628
Atm	LOC103391605	ENSCSEP00000003106	ENSCSEP00000022626	Non-specific serine/threonine protein kinase.	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA.	0.750
Atm	atr	ENSCSEP00000003106	ENSCSEP00000005728	Non-specific serine/threonine protein kinase.	ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	0.997
Atm	ercc1	ENSCSEP00000003106	ENSCSEP00000015922	Non-specific serine/threonine protein kinase.	Excision repair cross-complementation group 1.	0.695
Atm	nek2	ENSCSEP00000003106	ENSCSEP00000032514	Non-specific serine/threonine protein kinase.	NIMA-related kinase 2.	0.401
Atm	rad50	ENSCSEP00000003106	ENSCSEP00000023298	Non-specific serine/threonine protein kinase.	RAD50 homolog, double strand break repair protein.	0.998
Atm	sirt6	ENSCSEP00000003106	ENSCSEP00000022100	Non-specific serine/threonine protein kinase.	Sirtuin 6.	0.432
Atm	uchl5	ENSCSEP00000003106	ENSCSEP00000002785	Non-specific serine/threonine protein kinase.	Ubiquitin carboxyl-terminal hydrolase.	0.489
Atm	xrcc5	ENSCSEP00000003106	ENSCSEP00000016691	Non-specific serine/threonine protein kinase.	X-ray repair complementing defective repair in Chinese hamster cells 5.	0.937
ENSCSEP00000016664	cct2	ENSCSEP00000016664	ENSCSEP00000028886	Chaperonin containing TCP1, subunit 5 (epsilon).	Chaperonin containing TCP1, subunit 2 (beta).	0.999
ENSCSEP00000016664	cct3	ENSCSEP00000016664	ENSCSEP00000028524	Chaperonin containing TCP1, subunit 5 (epsilon).	T-complex protein 1 subunit gamma.	0.999
ENSCSEP00000018388	Atm	ENSCSEP00000018388	ENSCSEP00000003106	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.716
ENSCSEP00000018388	LOC103391605	ENSCSEP00000018388	ENSCSEP00000022626	Uncharacterized protein.	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA.	0.987
ENSCSEP00000018388	ercc1	ENSCSEP00000018388	ENSCSEP00000015922	Uncharacterized protein.	Excision repair cross-complementation group 1.	0.970
ENSCSEP00000018388	rad50	ENSCSEP00000018388	ENSCSEP00000023298	Uncharacterized protein.	RAD50 homolog, double strand break repair protein.	0.607
ENSCSEP00000023562	Atm	ENSCSEP00000023562	ENSCSEP00000003106	ATRX chromatin remodeler.	Non-specific serine/threonine protein kinase.	0.628
ENSCSEP00000023562	LOC103379738	ENSCSEP00000023562	ENSCSEP00000000372	ATRX chromatin remodeler.	Uncharacterized protein.	0.478
ENSCSEP00000023562	Pot1	ENSCSEP00000023562	ENSCSEP00000002233	ATRX chromatin remodeler.	Telo_bind domain-containing protein.	0.573
ENSCSEP00000023562	ino80d	ENSCSEP00000023562	ENSCSEP00000004649	ATRX chromatin remodeler.	INO80 complex subunit Da.	0.407