STRINGSTRING
nat10 nat10 dcp2 dcp2 pinx1 pinx1 LOC103379738 LOC103379738 Pot1 Pot1 ENSCSEP00000006447 ENSCSEP00000006447 exosc10 exosc10 ten1 ten1 terf1 terf1 tfe3 tfe3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nat10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1038 aa)
dcp2Decapping mRNA 2. (390 aa)
pinx1G-patch domain-containing protein. (394 aa)
LOC103379738Uncharacterized protein. (550 aa)
Pot1Telo_bind domain-containing protein. (323 aa)
ENSCSEP00000006447TINF2_N domain-containing protein. (145 aa)
exosc10Exosome component 10. (896 aa)
ten1TEN1 subunit of CST complex. (133 aa)
terf1Telomeric repeat binding factor (NIMA-interacting) 1. (352 aa)
tfe3Guanine nucleotide binding protein-like 3 (nucleolar)-like. (554 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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