5 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103397105	Uncharacterized protein; Belongs to the AAA ATPase family. (806 aa)
	Lyst	Lysosomal trafficking regulator. (3692 aa)
	mvb12a	Uncharacterized protein. (285 aa)
	LOC103398200	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	ubxn6	UBX domain protein 6. (439 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103397105	LOC103398200	ENSCSEP00000018351	ENSCSEP00000021019	Uncharacterized protein; Belongs to the AAA ATPase family.	Valosin containing protein; Belongs to the AAA ATPase family.	0.900
LOC103397105	ubxn6	ENSCSEP00000018351	ENSCSEP00000011413	Uncharacterized protein; Belongs to the AAA ATPase family.	UBX domain protein 6.	0.990
LOC103398200	LOC103397105	ENSCSEP00000021019	ENSCSEP00000018351	Valosin containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.900
LOC103398200	ubxn6	ENSCSEP00000021019	ENSCSEP00000011413	Valosin containing protein; Belongs to the AAA ATPase family.	UBX domain protein 6.	0.990
ubxn6	LOC103397105	ENSCSEP00000011413	ENSCSEP00000018351	UBX domain protein 6.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.990
ubxn6	LOC103398200	ENSCSEP00000011413	ENSCSEP00000021019	UBX domain protein 6.	Valosin containing protein; Belongs to the AAA ATPase family.	0.990