(35 nodes) Homologous chromosome segregation network (Cynoglossus semilaevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSCSEP00000000376	MutS_IV domain-containing protein. (97 aa)
	Msh4	MutS homolog 4. (343 aa)
	mlh3	MutL homolog 3 (E. coli). (1127 aa)
	meiob	Methionine sulfoxide reductase B1b. (436 aa)
	msh5	MutS homolog 5. (527 aa)
	ENSCSEP00000003083	Telomere repeat binding bouquet formation protein 2. (145 aa)
	pttg1	Uncharacterized protein. (181 aa)
	Atm	Non-specific serine/threonine protein kinase. (3052 aa)
	ENSCSEP00000004295	FA complementation group D2. (1116 aa)
	ccne2	Cyclin E2; Belongs to the cyclin family. (399 aa)
	spo11	SPO11 initiator of meiotic double stranded breaks. (380 aa)
	Rnf212b	Si:ch211-10e2.1. (167 aa)
	Ndc1	NDC1 transmembrane nucleoporin. (654 aa)
	ENSCSEP00000022057	Uncharacterized protein. (992 aa)
	LOC103388859	BCL2 associated athanogene 6. (945 aa)
	terf1	Telomeric repeat binding factor (NIMA-interacting) 1. (352 aa)
	ENSCSEP00000004725	Rad21_Rec8_N domain-containing protein. (372 aa)
	Espl1	Uncharacterized protein. (197 aa)
	ccnb1ip1	Cyclin B1 interacting protein 1. (263 aa)
	trip13	Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family. (419 aa)
	tex11	Testis expressed 11. (909 aa)
	terb1	Uncharacterized protein. (659 aa)
	mei4	Meiotic double-stranded break formation protein 4. (360 aa)
	sirt7	Sirtuin 7. (408 aa)
	C1orf146	Uncharacterized protein. (174 aa)
	hormad1	HORMA domain containing 1. (373 aa)
	Syce3	Uncharacterized protein. (113 aa)
	dmc1	Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily. (361 aa)
	LOC103394434	Uncharacterized protein. (194 aa)
	psmc3ip	PSMC3 interacting protein. (212 aa)
	mlh1	MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli). (749 aa)
	Meioc	Uncharacterized protein. (266 aa)
	sgo1	Shugoshin 1. (615 aa)
	majin	Uncharacterized protein. (251 aa)
	spata22	Spermatogenesis associated 22. (388 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Atm	ENSCSEP00000000376	ENSCSEP00000003106	ENSCSEP00000000376	Non-specific serine/threonine protein kinase.	MutS_IV domain-containing protein.	0.675
Atm	ENSCSEP00000004295	ENSCSEP00000003106	ENSCSEP00000004295	Non-specific serine/threonine protein kinase.	FA complementation group D2.	0.721
Atm	Msh4	ENSCSEP00000003106	ENSCSEP00000000382	Non-specific serine/threonine protein kinase.	MutS homolog 4.	0.675
Atm	dmc1	ENSCSEP00000003106	ENSCSEP00000030798	Non-specific serine/threonine protein kinase.	Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily.	0.801
Atm	hormad1	ENSCSEP00000003106	ENSCSEP00000014928	Non-specific serine/threonine protein kinase.	HORMA domain containing 1.	0.436
Atm	meiob	ENSCSEP00000003106	ENSCSEP00000001347	Non-specific serine/threonine protein kinase.	Methionine sulfoxide reductase B1b.	0.794
Atm	mlh1	ENSCSEP00000003106	ENSCSEP00000027286	Non-specific serine/threonine protein kinase.	MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli).	0.843
Atm	mlh3	ENSCSEP00000003106	ENSCSEP00000000764	Non-specific serine/threonine protein kinase.	MutL homolog 3 (E. coli).	0.674
Atm	msh5	ENSCSEP00000003106	ENSCSEP00000002543	Non-specific serine/threonine protein kinase.	MutS homolog 5.	0.677
Atm	spo11	ENSCSEP00000003106	ENSCSEP00000032134	Non-specific serine/threonine protein kinase.	SPO11 initiator of meiotic double stranded breaks.	0.717
Atm	terf1	ENSCSEP00000003106	ENSCSEP00000015527	Non-specific serine/threonine protein kinase.	Telomeric repeat binding factor (NIMA-interacting) 1.	0.687
C1orf146	msh5	ENSCSEP00000012922	ENSCSEP00000002543	Uncharacterized protein.	MutS homolog 5.	0.477
C1orf146	tex11	ENSCSEP00000012922	ENSCSEP00000007561	Uncharacterized protein.	Testis expressed 11.	0.457
ENSCSEP00000000376	Atm	ENSCSEP00000000376	ENSCSEP00000003106	MutS_IV domain-containing protein.	Non-specific serine/threonine protein kinase.	0.675
ENSCSEP00000000376	ENSCSEP00000004725	ENSCSEP00000000376	ENSCSEP00000004725	MutS_IV domain-containing protein.	Rad21_Rec8_N domain-containing protein.	0.470
ENSCSEP00000000376	Msh4	ENSCSEP00000000376	ENSCSEP00000000382	MutS_IV domain-containing protein.	MutS homolog 4.	0.777
ENSCSEP00000000376	ccnb1ip1	ENSCSEP00000000376	ENSCSEP00000006858	MutS_IV domain-containing protein.	Cyclin B1 interacting protein 1.	0.513
ENSCSEP00000000376	dmc1	ENSCSEP00000000376	ENSCSEP00000030798	MutS_IV domain-containing protein.	Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily.	0.639
ENSCSEP00000000376	hormad1	ENSCSEP00000000376	ENSCSEP00000014928	MutS_IV domain-containing protein.	HORMA domain containing 1.	0.424
ENSCSEP00000000376	meiob	ENSCSEP00000000376	ENSCSEP00000001347	MutS_IV domain-containing protein.	Methionine sulfoxide reductase B1b.	0.649