36 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	vps4a	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (445 aa)
	LOC103378644	Lysosomal associated membrane protein 1. (370 aa)
	cadps	Ca2+-dependent activator protein for secretion b. (1376 aa)
	CADPS2	Calcium dependent secretion activator 2. (1290 aa)
	ENSCSEP00000002996	Synaptotagmin VIIb. (497 aa)
	ENSCSEP00000003001	Uncharacterized protein. (73 aa)
	LOC103376678	Uncharacterized protein; Belongs to the AAA ATPase family. (418 aa)
	atp13a2	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1158 aa)
	gab2	GRB2-associated binding protein 2. (654 aa)
	fgb	Fibrinogen beta chain. (495 aa)
	LOC103380130	ZP domain-containing protein. (447 aa)
	LOC103380297	Synaptotagmin VIIa. (571 aa)
	hras-2	Zgc:123278. (192 aa)
	tsg101	Tumor susceptibility 101a. (390 aa)
	hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate. (803 aa)
	LOC103386310	GATA binding protein 1a. (429 aa)
	snx4	Sorting nexin 4. (464 aa)
	cdk5	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	LOC103379416	Secretory carrier-associated membrane protein. (227 aa)
	scamp5	Secretory carrier-associated membrane protein. (230 aa)
	LOC103397425	Vesicle-associated membrane protein 8 (endobrevin). (122 aa)
	kiaa0100	Si:ch211-259g3.4. (2188 aa)
	LOC103397214	Uncharacterized protein. (228 aa)
	stam	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1. (443 aa)
	LOC103379169	Synaptotagmin IXa. (563 aa)
	pdcd6ip	Programmed cell death 6 interacting protein. (752 aa)
	ENSCSEP00000026930	Uncharacterized protein. (205 aa)
	LOC103386620	Uncharacterized protein. (1223 aa)
	Gata1	Uncharacterized protein. (289 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (436 aa)
	ENSCSEP00000028340	Si:dkey-185p13.1. (73 aa)
	Rab27a	RAB27A, member RAS oncogene family. (159 aa)
	ENSCSEP00000029443	Uncharacterized protein. (54 aa)
	LOC103397608	Uncharacterized protein. (218 aa)
	pla2g6	Phospholipase A2, group VI (cytosolic, calcium-independent). (836 aa)
	syt9	Synaptotagmin IXb. (527 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000028340	hgs	ENSCSEP00000028340	ENSCSEP00000013607	Si:dkey-185p13.1.	Hepatocyte growth factor-regulated tyrosine kinase substrate.	0.488
ENSCSEP00000028340	hras-2	ENSCSEP00000028340	ENSCSEP00000012292	Si:dkey-185p13.1.	Zgc:123278.	0.422
ENSCSEP00000028340	pdcd6ip	ENSCSEP00000028340	ENSCSEP00000025518	Si:dkey-185p13.1.	Programmed cell death 6 interacting protein.	0.713
ENSCSEP00000028340	tsg101	ENSCSEP00000028340	ENSCSEP00000012315	Si:dkey-185p13.1.	Tumor susceptibility 101a.	0.422
LOC103376678	VPS4B	ENSCSEP00000006294	ENSCSEP00000028331	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.900
LOC103376678	hgs	ENSCSEP00000006294	ENSCSEP00000013607	Uncharacterized protein; Belongs to the AAA ATPase family.	Hepatocyte growth factor-regulated tyrosine kinase substrate.	0.488
LOC103376678	hras-2	ENSCSEP00000006294	ENSCSEP00000012292	Uncharacterized protein; Belongs to the AAA ATPase family.	Zgc:123278.	0.422
LOC103376678	pdcd6ip	ENSCSEP00000006294	ENSCSEP00000025518	Uncharacterized protein; Belongs to the AAA ATPase family.	Programmed cell death 6 interacting protein.	0.713
LOC103376678	tsg101	ENSCSEP00000006294	ENSCSEP00000012315	Uncharacterized protein; Belongs to the AAA ATPase family.	Tumor susceptibility 101a.	0.422
LOC103376678	vps4a	ENSCSEP00000006294	ENSCSEP00000033986	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.937
LOC103378644	hgs	ENSCSEP00000000736	ENSCSEP00000013607	Lysosomal associated membrane protein 1.	Hepatocyte growth factor-regulated tyrosine kinase substrate.	0.414
LOC103379169	LOC103397425	ENSCSEP00000023157	ENSCSEP00000021105	Synaptotagmin IXa.	Vesicle-associated membrane protein 8 (endobrevin).	0.544
LOC103397425	LOC103379169	ENSCSEP00000021105	ENSCSEP00000023157	Vesicle-associated membrane protein 8 (endobrevin).	Synaptotagmin IXa.	0.544
LOC103397425	hgs	ENSCSEP00000021105	ENSCSEP00000013607	Vesicle-associated membrane protein 8 (endobrevin).	Hepatocyte growth factor-regulated tyrosine kinase substrate.	0.594
LOC103397425	stam	ENSCSEP00000021105	ENSCSEP00000022010	Vesicle-associated membrane protein 8 (endobrevin).	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.	0.589
LOC103397425	syt9	ENSCSEP00000021105	ENSCSEP00000033479	Vesicle-associated membrane protein 8 (endobrevin).	Synaptotagmin IXb.	0.544
VPS4B	LOC103376678	ENSCSEP00000028331	ENSCSEP00000006294	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.900
VPS4B	hgs	ENSCSEP00000028331	ENSCSEP00000013607	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Hepatocyte growth factor-regulated tyrosine kinase substrate.	0.488
VPS4B	hras-2	ENSCSEP00000028331	ENSCSEP00000012292	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Zgc:123278.	0.422
VPS4B	pdcd6ip	ENSCSEP00000028331	ENSCSEP00000025518	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Programmed cell death 6 interacting protein.	0.713