25 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	srf	Serum response factor b. (632 aa)
	slc40a1	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (563 aa)
	Gata1	Uncharacterized protein. (289 aa)
	LOC103397715	SH2 domain-containing protein. (737 aa)
	LOC103383297	MADS-box domain-containing protein. (475 aa)
	maea	Macrophage erythroblast attacher. (396 aa)
	melk	Non-specific serine/threonine protein kinase. (688 aa)
	LOC103384928	5-aminolevulinate synthase. (591 aa)
	ercc2	Excision repair cross-complementation group 2. (760 aa)
	ENSCSEP00000010305	Uncharacterized protein. (109 aa)
	med1	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1707 aa)
	lyar	Ly1 antibody reactive. (341 aa)
	ENSCSEP00000013308	Uncharacterized protein. (137 aa)
	ENSCSEP00000014292	SH2B adaptor protein 3. (545 aa)
	bdh2	3-hydroxybutyrate dehydrogenase, type 2. (245 aa)
	tert	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1024 aa)
	LOC103386310	GATA binding protein 1a. (429 aa)
	arid4a	AT rich interactive domain 4A (RBP1-like). (1431 aa)
	LOC103394163	Uncharacterized protein. (152 aa)
	lmo2	LIM domain only 2 (rhombotin-like 1). (162 aa)
	epo	Erythropoietin; Erythropoietin is the principal hormone involved in the regulation of erythrocyte differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Belongs to the EPO/TPO family. (204 aa)
	LOC103397178	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (324 aa)
	LOC103388963	Ribosomal protein S19. (138 aa)
	LOC103398227	Solute carrier family 25 member 37; Belongs to the mitochondrial carrier (TC 2.A.29) family. (351 aa)
	LOC103396034	T-cell acute lymphocytic leukemia 1. (467 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Gata1	LOC103384928	ENSCSEP00000028010	ENSCSEP00000008000	Uncharacterized protein.	5-aminolevulinate synthase.	0.457
Gata1	LOC103396034	ENSCSEP00000028010	ENSCSEP00000025387	Uncharacterized protein.	T-cell acute lymphocytic leukemia 1.	0.850
Gata1	lmo2	ENSCSEP00000028010	ENSCSEP00000020468	Uncharacterized protein.	LIM domain only 2 (rhombotin-like 1).	0.944
Gata1	med1	ENSCSEP00000028010	ENSCSEP00000011890	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.405
LOC103383297	srf	ENSCSEP00000032795	ENSCSEP00000023555	MADS-box domain-containing protein.	Serum response factor b.	0.903
LOC103384928	Gata1	ENSCSEP00000008000	ENSCSEP00000028010	5-aminolevulinate synthase.	Uncharacterized protein.	0.457
LOC103384928	LOC103386310	ENSCSEP00000008000	ENSCSEP00000015426	5-aminolevulinate synthase.	GATA binding protein 1a.	0.457
LOC103384928	LOC103397178	ENSCSEP00000008000	ENSCSEP00000020923	5-aminolevulinate synthase.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.424
LOC103384928	LOC103398227	ENSCSEP00000008000	ENSCSEP00000022793	5-aminolevulinate synthase.	Solute carrier family 25 member 37; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.424
LOC103386310	LOC103384928	ENSCSEP00000015426	ENSCSEP00000008000	GATA binding protein 1a.	5-aminolevulinate synthase.	0.457
LOC103386310	LOC103396034	ENSCSEP00000015426	ENSCSEP00000025387	GATA binding protein 1a.	T-cell acute lymphocytic leukemia 1.	0.850
LOC103386310	lmo2	ENSCSEP00000015426	ENSCSEP00000020468	GATA binding protein 1a.	LIM domain only 2 (rhombotin-like 1).	0.944
LOC103386310	med1	ENSCSEP00000015426	ENSCSEP00000011890	GATA binding protein 1a.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.405
LOC103388963	lyar	ENSCSEP00000022424	ENSCSEP00000013239	Ribosomal protein S19.	Ly1 antibody reactive.	0.679
LOC103388963	med1	ENSCSEP00000022424	ENSCSEP00000011890	Ribosomal protein S19.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.945
LOC103394163	lyar	ENSCSEP00000020010	ENSCSEP00000013239	Uncharacterized protein.	Ly1 antibody reactive.	0.679
LOC103394163	med1	ENSCSEP00000020010	ENSCSEP00000011890	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.945
LOC103396034	Gata1	ENSCSEP00000025387	ENSCSEP00000028010	T-cell acute lymphocytic leukemia 1.	Uncharacterized protein.	0.850
LOC103396034	LOC103386310	ENSCSEP00000025387	ENSCSEP00000015426	T-cell acute lymphocytic leukemia 1.	GATA binding protein 1a.	0.850
LOC103396034	lmo2	ENSCSEP00000025387	ENSCSEP00000020468	T-cell acute lymphocytic leukemia 1.	LIM domain only 2 (rhombotin-like 1).	0.983