STRINGSTRING
LOC103393291 LOC103393291 adar adar LOC103383557 LOC103383557 LOC103378402 LOC103378402 gar1 gar1 LOC103380263 LOC103380263 SP3 SP3 sumo1 sumo1 sae1 sae1 ENSCSEP00000011692 ENSCSEP00000011692 LOC103392195 LOC103392195 ube2i ube2i sumo2 sumo2 mib1 mib1 kri1 kri1 cdk5rap3 cdk5rap3 LOC103396034 LOC103396034 ENSCSEP00000029068 ENSCSEP00000029068 cbfb cbfb
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103393291Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
adarAdenosine deaminase RNA specific. (1367 aa)
LOC103383557Small ubiquitin-related modifier. (96 aa)
LOC103378402Small ubiquitin-related modifier. (94 aa)
gar1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (222 aa)
LOC103380263Sp3b transcription factor. (646 aa)
SP3Sp3a transcription factor. (747 aa)
sumo1Small ubiquitin-related modifier. (101 aa)
sae1SUMO1 activating enzyme subunit 1. (348 aa)
ENSCSEP00000011692Ubiquitin-like domain-containing protein. (102 aa)
LOC103392195Small ubiquitin-related modifier. (100 aa)
ube2iUbiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
sumo2Ubiquitin-like domain-containing protein. (149 aa)
mib1Mindbomb E3 ubiquitin protein ligase 1. (1041 aa)
kri1KRI1 homolog. (752 aa)
cdk5rap3CDK5 regulatory subunit associated protein 3. (504 aa)
LOC103396034T-cell acute lymphocytic leukemia 1. (467 aa)
ENSCSEP00000029068Microfibril associated protein 5. (117 aa)
cbfbCore-binding factor subunit beta. (188 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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