STRINGSTRING
ssb ssb exosc4 exosc4 Atm Atm exosc10 exosc10 mtpap mtpap LOC103396910 LOC103396910 lsm1 lsm1 xrn1 xrn1 dcp2 dcp2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ssbSmall RNA binding exonuclease protection factor La. (399 aa)
exosc4Exosome component 4. (245 aa)
AtmNon-specific serine/threonine protein kinase. (3052 aa)
exosc10Exosome component 10. (896 aa)
mtpapMitochondrial poly(A) polymerase. (563 aa)
LOC103396910U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (184 aa)
lsm1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (145 aa)
xrn15'-3' exoribonuclease 1. (1618 aa)
dcp2Decapping mRNA 2. (390 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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