11 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103391830	UDP-glucose glycoprotein glucosyltransferase 2. (1482 aa)
	uggt1	UDP-glucose glycoprotein glucosyltransferase 1. (1540 aa)
	RNF5	Ring finger protein 5. (207 aa)
	derl1	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (254 aa)
	LOC103397105	Uncharacterized protein; Belongs to the AAA ATPase family. (806 aa)
	LOC103388859	BCL2 associated athanogene 6. (945 aa)
	LOC103398200	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	rnf185	Ring finger protein 185. (193 aa)
	aup1	AUP1 lipid droplet regulating VLDL assembly factor. (416 aa)
	LOC103398999	Ubiquitin recognition factor in ER associated degradation 1. (311 aa)
	ufd1	Uncharacterized protein. (297 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103388859	LOC103397105	ENSCSEP00000018798	ENSCSEP00000018351	BCL2 associated athanogene 6.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.407
LOC103388859	LOC103398200	ENSCSEP00000018798	ENSCSEP00000021019	BCL2 associated athanogene 6.	Valosin containing protein; Belongs to the AAA ATPase family.	0.407
LOC103391830	uggt1	ENSCSEP00000008404	ENSCSEP00000008459	UDP-glucose glycoprotein glucosyltransferase 2.	UDP-glucose glycoprotein glucosyltransferase 1.	0.902
LOC103397105	LOC103388859	ENSCSEP00000018351	ENSCSEP00000018798	Uncharacterized protein; Belongs to the AAA ATPase family.	BCL2 associated athanogene 6.	0.407
LOC103397105	LOC103398200	ENSCSEP00000018351	ENSCSEP00000021019	Uncharacterized protein; Belongs to the AAA ATPase family.	Valosin containing protein; Belongs to the AAA ATPase family.	0.900
LOC103397105	LOC103398999	ENSCSEP00000018351	ENSCSEP00000029964	Uncharacterized protein; Belongs to the AAA ATPase family.	Ubiquitin recognition factor in ER associated degradation 1.	0.929
LOC103397105	RNF5	ENSCSEP00000018351	ENSCSEP00000017777	Uncharacterized protein; Belongs to the AAA ATPase family.	Ring finger protein 5.	0.542
LOC103397105	aup1	ENSCSEP00000018351	ENSCSEP00000026522	Uncharacterized protein; Belongs to the AAA ATPase family.	AUP1 lipid droplet regulating VLDL assembly factor.	0.536
LOC103397105	derl1	ENSCSEP00000018351	ENSCSEP00000017906	Uncharacterized protein; Belongs to the AAA ATPase family.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.956
LOC103397105	rnf185	ENSCSEP00000018351	ENSCSEP00000024948	Uncharacterized protein; Belongs to the AAA ATPase family.	Ring finger protein 185.	0.542
LOC103397105	ufd1	ENSCSEP00000018351	ENSCSEP00000030841	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.929
LOC103398200	LOC103388859	ENSCSEP00000021019	ENSCSEP00000018798	Valosin containing protein; Belongs to the AAA ATPase family.	BCL2 associated athanogene 6.	0.407
LOC103398200	LOC103397105	ENSCSEP00000021019	ENSCSEP00000018351	Valosin containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.900
LOC103398200	LOC103398999	ENSCSEP00000021019	ENSCSEP00000029964	Valosin containing protein; Belongs to the AAA ATPase family.	Ubiquitin recognition factor in ER associated degradation 1.	0.929
LOC103398200	RNF5	ENSCSEP00000021019	ENSCSEP00000017777	Valosin containing protein; Belongs to the AAA ATPase family.	Ring finger protein 5.	0.542
LOC103398200	aup1	ENSCSEP00000021019	ENSCSEP00000026522	Valosin containing protein; Belongs to the AAA ATPase family.	AUP1 lipid droplet regulating VLDL assembly factor.	0.536
LOC103398200	derl1	ENSCSEP00000021019	ENSCSEP00000017906	Valosin containing protein; Belongs to the AAA ATPase family.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.956
LOC103398200	rnf185	ENSCSEP00000021019	ENSCSEP00000024948	Valosin containing protein; Belongs to the AAA ATPase family.	Ring finger protein 185.	0.542
LOC103398200	ufd1	ENSCSEP00000021019	ENSCSEP00000030841	Valosin containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.929
LOC103398999	LOC103397105	ENSCSEP00000029964	ENSCSEP00000018351	Ubiquitin recognition factor in ER associated degradation 1.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.929