STRINGSTRING
sirt6 sirt6 LOC103396450 LOC103396450 rab23 rab23 pkig pkig derl2 derl2 ENSCSEP00000013612 ENSCSEP00000013612 chp1 chp1 LOC103396927 LOC103396927 LOC103393326 LOC103393326 Svip Svip ube2j1 ube2j1 LOC103377312 LOC103377312 ENSCSEP00000033739 ENSCSEP00000033739 cep131 cep131 ube2g2 ube2g2 LOC103377433 LOC103377433 cdk5 cdk5 nkd1 nkd1 Bag3 Bag3 erlec1 erlec1 Nf1 Nf1 os9 os9 itgb1bp1 itgb1bp1 LOC103392231 LOC103392231
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sirt6Sirtuin 6. (351 aa)
LOC103396450Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
rab23RAB23, member RAS oncogene family. (204 aa)
pkigProtein kinase (cAMP-dependent, catalytic) inhibitor gamma. (79 aa)
derl2Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (239 aa)
ENSCSEP00000013612Uncharacterized protein. (194 aa)
chp1Calcineurin-like EF-hand protein 1. (223 aa)
LOC103396927BCL2 associated athanogene 4. (357 aa)
LOC103393326RAN GTPase activating protein 1a. (547 aa)
SvipSi:ch73-147o17.1. (89 aa)
ube2j1Ubiquitin-conjugating enzyme E2, J1. (331 aa)
LOC103377312Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (221 aa)
ENSCSEP00000033739Leucine-rich repeat kinase 2. (2316 aa)
cep131Centrosomal protein 131. (1299 aa)
ube2g2Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (250 aa)
LOC103377433Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (192 aa)
cdk5Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
nkd1NKD inhibitor of WNT signaling pathway 1. (448 aa)
Bag3WW domain-containing protein. (189 aa)
erlec1Endoplasmic reticulum lectin 1. (485 aa)
Nf1Neurofibromin 1b. (2702 aa)
os9OS9 endoplasmic reticulum lectin. (639 aa)
itgb1bp1Integrin beta 1 binding protein 1. (198 aa)
LOC103392231BRCA1 associated RING domain 1. (795 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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