STRINGSTRING
tmem175 tmem175 ENSCSEP00000033935 ENSCSEP00000033935 rab20 rab20 LOC103380297 LOC103380297 ENSCSEP00000002996 ENSCSEP00000002996 ENSCSEP00000033937 ENSCSEP00000033937 LOC103386171 LOC103386171 pikfyve pikfyve ENSCSEP00000003001 ENSCSEP00000003001 cln3 cln3 RAB7A RAB7A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tmem175Transmembrane protein 175. (479 aa)
ENSCSEP00000033935SPG11 vesicle trafficking associated, spatacsin. (1324 aa)
rab20RAB20, member RAS oncogene family. (231 aa)
LOC103380297Synaptotagmin VIIa. (571 aa)
ENSCSEP00000002996Synaptotagmin VIIb. (497 aa)
ENSCSEP00000033937Uncharacterized protein. (697 aa)
LOC103386171RAB7a, member RAS oncogene family. (207 aa)
pikfyvePhosphoinositide kinase, FYVE finger containing. (2060 aa)
ENSCSEP00000003001Uncharacterized protein. (73 aa)
cln3Battenin. (439 aa)
RAB7ARAB7A, member RAS oncogene family. (236 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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