STRINGSTRING
prkn prkn syt1 syt1 plaa plaa rnf157 rnf157 SYT2 SYT2 mul1 mul1 ENSCSEP00000028762 ENSCSEP00000028762 LOC103382006 LOC103382006
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
prknE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (447 aa)
syt1Synaptotagmin Ia. (452 aa)
plaaPhospholipase A2-activating protein. (766 aa)
rnf157Ring finger protein 157. (477 aa)
SYT2Synaptotagmin 2. (429 aa)
mul1Mitochondrial E3 ubiquitin protein ligase 1b. (357 aa)
ENSCSEP00000028762Synaptotagmin IIa. (430 aa)
LOC103382006Uncharacterized protein. (411 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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