44 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rffl	Ring finger and FYVE-like domain containing E3 ubiquitin protein ligase. (356 aa)
	LOC103390455	Ring finger protein 34b. (426 aa)
	Tnfaip3	Tumor necrosis factor, alpha-induced protein 3. (848 aa)
	LOC103381004	Galectin. (438 aa)
	sfrp2	Secreted frizzled-related protein 2. (295 aa)
	scg2	Uncharacterized protein. (554 aa)
	fgb	Fibrinogen beta chain. (495 aa)
	ENSCSEP00000011335	Zinc finger, MYND-type containing 11. (504 aa)
	brca1	Uncharacterized protein. (1217 aa)
	LOC103396898	Interleukin-1. (246 aa)
	LOC103381014	Galectin. (285 aa)
	zc3hc1	Zinc finger, C3HC-type containing 1. (499 aa)
	LOC103386310	GATA binding protein 1a. (429 aa)
	gclc	Glutamate-cysteine ligase, catalytic subunit. (630 aa)
	ENSCSEP00000015850	Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (463 aa)
	ENSCSEP00000016001	Uncharacterized protein. (400 aa)
	ENSCSEP00000016080	Uncharacterized protein; Belongs to the peptidase C14A family. (471 aa)
	LOC103384031	Mab-21 domain-containing protein. (493 aa)
	rb1cc1	RB1-inducible coiled-coil 1. (1623 aa)
	ENSCSEP00000017308	Uncharacterized protein. (251 aa)
	unc5b	Unc-5 netrin receptor B. (947 aa)
	LOC103381839	Galectin. (237 aa)
	ENSCSEP00000019637	Growth arrest-specific 1b. (240 aa)
	map2k5	Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily. (476 aa)
	ar	Androgen receptor. (629 aa)
	htt	Huntingtin. (3101 aa)
	LOC103377124	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (492 aa)
	LOC103385228	Tyrosine-protein kinase. (551 aa)
	psme3	Proteasome activator subunit 3. (240 aa)
	gdnf	Glial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake. (218 aa)
	LOC103391230	Uncharacterized protein. (712 aa)
	LOC103396004	Secretogranin II (chromogranin C), b. (601 aa)
	itprip	Inositol 1,4,5-trisphosphate receptor interacting protein. (510 aa)
	Birc6	Uncharacterized protein. (175 aa)
	pea15	Proliferation and apoptosis adaptor protein 15. (130 aa)
	Gata1	Uncharacterized protein. (289 aa)
	faim	Fas apoptotic inhibitory molecule a. (180 aa)
	rnf34	Ring finger protein 34a. (380 aa)
	LOC103385566	Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family. (418 aa)
	LOC103378548	Uncharacterized protein. (343 aa)
	LOC103386740	Tyrosine-protein kinase. (558 aa)
	gclm	Glutamate-cysteine ligase, modifier subunit. (276 aa)
	LOC103397875	Interleukin-1; Belongs to the IL-1 family. (246 aa)
	ENSCSEP00000025908	UBIQUITIN_CONJUGAT_2 domain-containing protein. (149 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Birc6	ENSCSEP00000016080	ENSCSEP00000025941	ENSCSEP00000016080	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.760
Birc6	ENSCSEP00000025908	ENSCSEP00000025941	ENSCSEP00000025908	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.966
Birc6	LOC103385228	ENSCSEP00000025941	ENSCSEP00000023039	Uncharacterized protein.	Tyrosine-protein kinase.	0.454
Birc6	LOC103386740	ENSCSEP00000025941	ENSCSEP00000030984	Uncharacterized protein.	Tyrosine-protein kinase.	0.454
Birc6	brca1	ENSCSEP00000025941	ENSCSEP00000011390	Uncharacterized protein.	Uncharacterized protein.	0.410
Birc6	pea15	ENSCSEP00000025941	ENSCSEP00000027179	Uncharacterized protein.	Proliferation and apoptosis adaptor protein 15.	0.736
Birc6	psme3	ENSCSEP00000025941	ENSCSEP00000024007	Uncharacterized protein.	Proteasome activator subunit 3.	0.567
ENSCSEP00000016001	gdnf	ENSCSEP00000016001	ENSCSEP00000024335	Uncharacterized protein.	Glial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake.	0.813
ENSCSEP00000016080	Birc6	ENSCSEP00000016080	ENSCSEP00000025941	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.760
ENSCSEP00000016080	ENSCSEP00000025908	ENSCSEP00000016080	ENSCSEP00000025908	Uncharacterized protein; Belongs to the peptidase C14A family.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.739
ENSCSEP00000016080	LOC103396898	ENSCSEP00000016080	ENSCSEP00000012188	Uncharacterized protein; Belongs to the peptidase C14A family.	Interleukin-1.	0.403
ENSCSEP00000016080	LOC103397875	ENSCSEP00000016080	ENSCSEP00000032065	Uncharacterized protein; Belongs to the peptidase C14A family.	Interleukin-1; Belongs to the IL-1 family.	0.403
ENSCSEP00000017308	ENSCSEP00000019637	ENSCSEP00000017308	ENSCSEP00000019637	Uncharacterized protein.	Growth arrest-specific 1b.	0.905
ENSCSEP00000019637	ENSCSEP00000017308	ENSCSEP00000019637	ENSCSEP00000017308	Growth arrest-specific 1b.	Uncharacterized protein.	0.905
ENSCSEP00000025908	Birc6	ENSCSEP00000025908	ENSCSEP00000025941	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.966
ENSCSEP00000025908	ENSCSEP00000016080	ENSCSEP00000025908	ENSCSEP00000016080	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.739
ENSCSEP00000025908	LOC103385228	ENSCSEP00000025908	ENSCSEP00000023039	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Tyrosine-protein kinase.	0.454
ENSCSEP00000025908	LOC103386740	ENSCSEP00000025908	ENSCSEP00000030984	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Tyrosine-protein kinase.	0.454
ENSCSEP00000025908	brca1	ENSCSEP00000025908	ENSCSEP00000011390	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.409
ENSCSEP00000025908	pea15	ENSCSEP00000025908	ENSCSEP00000027179	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Proliferation and apoptosis adaptor protein 15.	0.736