8 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSCSEP00000003354	GRAM domain containing 1Bb. (668 aa)
	LOC103395030	VASt domain-containing protein. (778 aa)
	gramd1c	GRAM domain containing 1c. (481 aa)
	saraf	Store-operated calcium entry-associated regulatory factor. (349 aa)
	LOC103394320	SAC domain-containing protein. (585 aa)
	kiaa0100	Si:ch211-259g3.4. (2188 aa)
	sacm1l	SAC1 like phosphatidylinositide phosphatase b. (548 aa)
	Gramd1b	Uncharacterized protein. (134 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000003354	Gramd1b	ENSCSEP00000003354	ENSCSEP00000003334	GRAM domain containing 1Bb.	Uncharacterized protein.	0.611
Gramd1b	ENSCSEP00000003354	ENSCSEP00000003334	ENSCSEP00000003354	Uncharacterized protein.	GRAM domain containing 1Bb.	0.611
Gramd1b	LOC103395030	ENSCSEP00000003334	ENSCSEP00000029553	Uncharacterized protein.	VASt domain-containing protein.	0.628
LOC103394320	sacm1l	ENSCSEP00000024399	ENSCSEP00000016066	SAC domain-containing protein.	SAC1 like phosphatidylinositide phosphatase b.	0.901
LOC103395030	Gramd1b	ENSCSEP00000029553	ENSCSEP00000003334	VASt domain-containing protein.	Uncharacterized protein.	0.628
sacm1l	LOC103394320	ENSCSEP00000016066	ENSCSEP00000024399	SAC1 like phosphatidylinositide phosphatase b.	SAC domain-containing protein.	0.901