60 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ikbkb	Inhibitor of nuclear factor kappa B kinase subunit beta. (743 aa)
	ublcp1	Ubiquitin-like domain containing CTD phosphatase 1. (320 aa)
	faf1	Fas (TNFRSF6) associated factor 1. (670 aa)
	ubtd1	Ubiquitin domain containing 1b. (239 aa)
	LOC103396607	NEDD8 ubiquitin like modifier, like. (67 aa)
	ubfd1	Ubiquitin family domain containing 1. (275 aa)
	tmub2	Transmembrane and ubiquitin-like domain containing 2. (335 aa)
	LOC103392679	Elongin B. (132 aa)
	ENSCSEP00000033944	DNA-damage inducible protein 2. (402 aa)
	isg15	Interferon-stimulated protein 15. (162 aa)
	LOC103387369	Ubiquitin-like domain-containing protein. (254 aa)
	tbcb	Tubulin folding cofactor B. (260 aa)
	elob	Ubiquitin-like domain-containing protein. (119 aa)
	snrnp25	Small nuclear ribonucleoprotein 25. (184 aa)
	ENSCSEP00000016477	Rad60-SLD domain-containing protein. (141 aa)
	sf3a1	Splicing factor 3a, subunit 1. (786 aa)
	LOC103392195	Small ubiquitin-related modifier. (100 aa)
	LOC103388859	BCL2 associated athanogene 6. (945 aa)
	ubl7	Ubiquitin-like 7b (bone marrow stromal cell-derived). (420 aa)
	UBQLN1	Ubiquilin 1. (499 aa)
	usp14	Ubiquitin carboxyl-terminal hydrolase. (491 aa)
	ubl3	Ubiquitin-like protein. (117 aa)
	sumo2	Ubiquitin-like domain-containing protein. (149 aa)
	bag1	BCL2 associated athanogene 1. (226 aa)
	LOC103388934	HERPUD family member 2. (429 aa)
	LOC103393630	Ubiquitin-like domain-containing protein. (179 aa)
	LOC103395951	Ubiquitin-like domain-containing protein. (450 aa)
	ubl4a	Ubiquitin like 4A. (156 aa)
	LOC103394291	Ubiquitin-like domain-containing protein. (376 aa)
	ENSCSEP00000023759	Ubiquitin-like domain-containing protein. (92 aa)
	ANKUB1	Ankyrin repeat and ubiquitin domain containing 1. (489 aa)
	UBB	Ubiquitin B. (744 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (151 aa)
	Yod1	YOD1 deubiquitinase. (324 aa)
	uhrf2	Uncharacterized protein. (933 aa)
	ENSCSEP00000026706	Ubiquilin 4. (660 aa)
	usp48	Ubiquitin specific peptidase 48; Belongs to the peptidase C19 family. (1062 aa)
	RAD23B	RAD23 homolog B, nucleotide excision repair protein. (382 aa)
	uhrf1	Ubiquitin-like with PHD and ring finger domains 1. (803 aa)
	ubtd2	Ubiquitin domain containing 2. (270 aa)
	tbce	Tubulin folding cofactor E. (517 aa)
	iqub	IQ motif and ubiquitin domain containing. (799 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	fau	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	LOC103399826	RAD23 homolog A, nucleotide excision repair protein b. (386 aa)
	ENSCSEP00000003251	Ubiquitin-like domain-containing protein. (698 aa)
	UBL5	Ubiquitin like 5. (73 aa)
	LOC103399907	Midnolin. (544 aa)
	LOC103383557	Small ubiquitin-related modifier. (96 aa)
	LOC103378402	Small ubiquitin-related modifier. (94 aa)
	tbk1	TANK-binding kinase 1. (711 aa)
	prkn	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (447 aa)
	LOC103388364	Ubiquitin-like domain-containing protein. (81 aa)
	ENSCSEP00000006819	Ubiquitin-like domain-containing protein. (92 aa)
	LOC103377789	Tubulin folding cofactor E-like a. (429 aa)
	LOC103390851	Ubiquitin-like protein. (127 aa)
	sumo1	Small ubiquitin-related modifier. (101 aa)
	zfand4	Zinc finger, AN1-type domain 4. (688 aa)
	ENSCSEP00000011440	Ubiquitin-like domain-containing protein. (132 aa)
	ENSCSEP00000011692	Ubiquitin-like domain-containing protein. (102 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000003251	ENSCSEP00000006819	ENSCSEP00000003251	ENSCSEP00000006819	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.418
ENSCSEP00000003251	ENSCSEP00000011440	ENSCSEP00000003251	ENSCSEP00000011440	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.418
ENSCSEP00000003251	ENSCSEP00000023759	ENSCSEP00000003251	ENSCSEP00000023759	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.472
ENSCSEP00000003251	UBB	ENSCSEP00000003251	ENSCSEP00000025180	Ubiquitin-like domain-containing protein.	Ubiquitin B.	0.418
ENSCSEP00000003251	fau	ENSCSEP00000003251	ENSCSEP00000002889	Ubiquitin-like domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.418
ENSCSEP00000003251	isg15	ENSCSEP00000003251	ENSCSEP00000012121	Ubiquitin-like domain-containing protein.	Interferon-stimulated protein 15.	0.429
ENSCSEP00000003251	rps27a	ENSCSEP00000003251	ENSCSEP00000002392	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.630
ENSCSEP00000003251	uba52	ENSCSEP00000003251	ENSCSEP00000025345	Ubiquitin-like domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.472
ENSCSEP00000003251	ubl4a	ENSCSEP00000003251	ENSCSEP00000023017	Ubiquitin-like domain-containing protein.	Ubiquitin like 4A.	0.418
ENSCSEP00000003251	zfand4	ENSCSEP00000003251	ENSCSEP00000010225	Ubiquitin-like domain-containing protein.	Zinc finger, AN1-type domain 4.	0.532
ENSCSEP00000006819	ENSCSEP00000003251	ENSCSEP00000006819	ENSCSEP00000003251	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.418
ENSCSEP00000006819	ENSCSEP00000011692	ENSCSEP00000006819	ENSCSEP00000011692	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.499
ENSCSEP00000006819	ENSCSEP00000016477	ENSCSEP00000006819	ENSCSEP00000016477	Ubiquitin-like domain-containing protein.	Rad60-SLD domain-containing protein.	0.499
ENSCSEP00000006819	ENSCSEP00000023759	ENSCSEP00000006819	ENSCSEP00000023759	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.800
ENSCSEP00000006819	ENSCSEP00000026706	ENSCSEP00000006819	ENSCSEP00000026706	Ubiquitin-like domain-containing protein.	Ubiquilin 4.	0.622
ENSCSEP00000006819	ENSCSEP00000033944	ENSCSEP00000006819	ENSCSEP00000033944	Ubiquitin-like domain-containing protein.	DNA-damage inducible protein 2.	0.540
ENSCSEP00000006819	LOC103378402	ENSCSEP00000006819	ENSCSEP00000004643	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.499
ENSCSEP00000006819	LOC103383557	ENSCSEP00000006819	ENSCSEP00000004585	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.499
ENSCSEP00000006819	LOC103388364	ENSCSEP00000006819	ENSCSEP00000006477	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.559
ENSCSEP00000006819	LOC103388859	ENSCSEP00000006819	ENSCSEP00000018798	Ubiquitin-like domain-containing protein.	BCL2 associated athanogene 6.	0.614