STRINGSTRING
smad1 smad1 kif16b kif16b ENSCSEP00000001772 ENSCSEP00000001772 LOC103382274 LOC103382274 foxk1 foxk1 ENSCSEP00000003395 ENSCSEP00000003395 irf6 irf6 foxk2 foxk2 slc4a1ap slc4a1ap afdn afdn ENSCSEP00000004958 ENSCSEP00000004958 Cep170 Cep170 mcrs1 mcrs1 ENSCSEP00000006822 ENSCSEP00000006822 phf12 phf12 ENSCSEP00000007764 ENSCSEP00000007764 KIF1C KIF1C irf5 irf5 ENSCSEP00000009436 ENSCSEP00000009436 kif1b kif1b LOC103397887 LOC103397887 smad6 smad6 LOC103380246 LOC103380246 aggf1 aggf1 irf7 irf7 chek2 chek2 ENSCSEP00000013021 ENSCSEP00000013021 LOC103376955 LOC103376955 aptx aptx irf4 irf4 LOC103397451 LOC103397451 ENSCSEP00000016349 ENSCSEP00000016349 LOC103398521 LOC103398521 kif13b kif13b LOC103387551 LOC103387551 smad9 smad9 SMAD3 SMAD3 LOC103379083 LOC103379083 rara-2 rara-2 Tifa Tifa LOC103391130 LOC103391130 ENSCSEP00000022604 ENSCSEP00000022604 irf8 irf8 LOC103378278 LOC103378278 irf9 irf9 LOC103394304 LOC103394304 Kif14 Kif14 kif1a kif1a SMAD4 SMAD4 ENSCSEP00000028934 ENSCSEP00000028934 ENSCSEP00000029844 ENSCSEP00000029844 LOC103382011 LOC103382011 Mdc1 Mdc1 smad7 smad7 smad2 smad2 ENSCSEP00000031429 ENSCSEP00000031429 snip1 snip1 slmap slmap LOC103392515 LOC103392515 LOC103392537 LOC103392537 LOC103385432 LOC103385432 rnf8 rnf8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
smad1Mothers against decapentaplegic homolog. (470 aa)
kif16bKinesin family member 16Ba; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1320 aa)
ENSCSEP00000001772Uncharacterized protein. (178 aa)
LOC103382274Si:ch211-176g6.2. (1010 aa)
foxk1Forkhead box K1. (678 aa)
ENSCSEP00000003395Ras association and DIL domains. (1078 aa)
irf6Interferon regulatory factor 6. (484 aa)
foxk2Forkhead box K2. (616 aa)
slc4a1apSolute carrier family 4 member 1 adaptor protein. (763 aa)
afdnAfadin, adherens junction formation factor a. (1573 aa)
ENSCSEP00000004958Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (538 aa)
Cep170FHA domain-containing protein. (134 aa)
mcrs1Microspherule protein 1. (479 aa)
ENSCSEP00000006822Kinesin family member 13A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1821 aa)
phf12PHD finger protein 12b. (1035 aa)
ENSCSEP00000007764Pleckstrin homology-like domain, family B, member 1b. (1269 aa)
KIF1CKinesin family member 1C; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1266 aa)
irf5Interferon regulatory factor 5. (459 aa)
ENSCSEP00000009436Centrosomal protein 170B. (1373 aa)
kif1bKinesin family member 1B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1696 aa)
LOC103397887Mothers against decapentaplegic homolog. (510 aa)
smad6Mothers against decapentaplegic homolog. (491 aa)
LOC103380246Mothers against decapentaplegic homolog. (425 aa)
aggf1Angiogenic factor with G patch and FHA domains 1. (734 aa)
irf7Interferon regulatory factor 7. (433 aa)
chek2Checkpoint kinase 2. (550 aa)
ENSCSEP00000013021Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (897 aa)
LOC103376955PH domain-containing protein. (1419 aa)
aptxAprataxin. (334 aa)
irf4Interferon regulatory factor 4a. (457 aa)
LOC103397451Mothers against decapentaplegic homolog. (437 aa)
ENSCSEP00000016349FHA domain-containing protein. (114 aa)
LOC103398521Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1932 aa)
kif13bKinesin family member 13Ba; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1682 aa)
LOC103387551Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1318 aa)
smad9Mothers against decapentaplegic homolog. (468 aa)
SMAD3Mothers against decapentaplegic homolog. (425 aa)
LOC103379083Mothers against decapentaplegic homolog. (548 aa)
rara-2Marker of proliferation Ki-67. (1946 aa)
TifaSi:ch211-15b10.6. (310 aa)
LOC103391130Mothers against decapentaplegic homolog. (473 aa)
ENSCSEP00000022604Mothers against decapentaplegic homolog. (472 aa)
irf8Interferon regulatory factor 8. (417 aa)
LOC103378278Polynucleotide kinase 3'-phosphatase. (591 aa)
irf9Interferon regulatory factor 9. (447 aa)
LOC103394304Mothers against decapentaplegic homolog. (573 aa)
Kif14Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1619 aa)
kif1aKinesin family member 1Ab; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1631 aa)
SMAD4Mothers against decapentaplegic homolog. (503 aa)
ENSCSEP00000028934Ras interacting protein 1. (968 aa)
ENSCSEP00000029844Protein phosphatase 1, regulatory subunit 8b. (335 aa)
LOC103382011Interferon regulatory factor 3. (453 aa)
Mdc1FHA domain-containing protein. (236 aa)
smad7Mothers against decapentaplegic homolog. (376 aa)
smad2Mothers against decapentaplegic homolog. (474 aa)
ENSCSEP00000031429Transcription factor 19 (SC1), like. (330 aa)
snip1Smad nuclear interacting protein. (364 aa)
slmapSarcolemma associated protein a. (884 aa)
LOC103392515Si:ch73-281f12.4. (1164 aa)
LOC103392537Uncharacterized protein. (564 aa)
LOC103385432Interferon regulatory factor 10. (398 aa)
rnf8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (540 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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