(66 nodes) Band 4.1 domain network (Cynoglossus semilaevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103389511	Uncharacterized protein. (1037 aa)
	myo7a	Myosin VIIAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2168 aa)
	epb41	Erythrocyte membrane protein band 4.1a. (874 aa)
	krit1	KRIT1 ankyrin repeat containing. (741 aa)
	Plekhh1	Pleckstrin homology domain containing, family H (with MyTH4 domain) member 1. (1190 aa)
	myo10	Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1709 aa)
	LOC103384971	Si:dkey-178k16.1. (1221 aa)
	frmd4a	FERM domain containing 4A. (1065 aa)
	fermt3	Fermitin family member 3b. (646 aa)
	nf2	Neurofibromin 2a (merlin). (591 aa)
	tyk2	Tyrosine-protein kinase. (1174 aa)
	EZR-2	Ezrin b. (585 aa)
	PTPN14	Protein tyrosine phosphatase non-receptor type 14. (1298 aa)
	ENSCSEP00000031742	FERM domain-containing protein. (134 aa)
	epb41l2	Erythrocyte membrane protein band 4.1 like 2. (1016 aa)
	ptpn4	Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily. (880 aa)
	ENSCSEP00000029312	Protein tyrosine phosphatase non-receptor type 13. (1088 aa)
	tln1	Talin 1. (2544 aa)
	frmd4b	FERM domain containing 4Bb. (836 aa)
	LOC103395797	Tyrosine-protein kinase. (1100 aa)
	LOC103395004	Neurofibromin 2b (merlin). (593 aa)
	ENSCSEP00000028371	Erythrocyte membrane protein band 4.1 like 5. (465 aa)
	jak1	Tyrosine-protein kinase. (1162 aa)
	ENSCSEP00000027680	Myosin regulatory light chain interacting protein a. (485 aa)
	frmd6	FERM domain containing 6. (606 aa)
	LOC103388490	FERM domain-containing protein. (2482 aa)
	RDX	Radixin. (572 aa)
	LOC103386308	FERM domain containing 4Ba. (1064 aa)
	ENSCSEP00000013470	FERM domain-containing protein. (168 aa)
	farp2	FERM, RhoGEF and pleckstrin domain protein 2. (1054 aa)
	ENSCSEP00000015631	Toll-like receptor 7. (1265 aa)
	EZR	Ezrin a. (586 aa)
	LOC103390968	FERM and PDZ domain containing 1b. (1658 aa)
	FRMPD4	Uncharacterized protein. (2026 aa)
	LOC103392206	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1708 aa)
	ENSCSEP00000018143	Talin 2a. (2302 aa)
	ENSCSEP00000018912	FERM domain containing 5. (563 aa)
	frmd3	FERM domain containing 3. (575 aa)
	ENSCSEP00000020197	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1101 aa)
	LOC103379437	FERM domain-containing protein. (571 aa)
	LOC103395301	Moesin a. (579 aa)
	LOC103398680	Protein tyrosine kinase 2 beta, b; Belongs to the protein kinase superfamily. Tyr protein kinase family. (992 aa)
	frmpd3	FERM and PDZ domain containing 3. (1727 aa)
	ENSCSEP00000023099	FERM and PDZ domain containing 1a. (265 aa)
	ENSCSEP00000023745	FERM domain-containing protein. (376 aa)
	LOC103395358	Myosin VIIAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2196 aa)
	frmd8	FERM domain containing 8. (468 aa)
	LOC103391227	Moesin b. (569 aa)
	epb41l3	Erythrocyte membrane protein band 4.1-like 3b. (1186 aa)
	LOC103397589	Tyrosine-protein kinase. (1126 aa)
	PLEKHH3	Pleckstrin homology, MyTH4 and FERM domain containing H3. (706 aa)
	ENSCSEP00000000986	Pleckstrin homology domain containing, family H (with MyTH4 domain) member 2. (1539 aa)
	ENSCSEP00000002456	Erythrocyte membrane protein band 4.1 like 4B. (494 aa)
	Ptpn3	Protein tyrosine phosphatase non-receptor type 3. (882 aa)
	fermt1	Fermitin family member 1. (668 aa)
	LOC103389360	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (942 aa)
	ENSCSEP00000004619	Myosin X, like 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1919 aa)
	jak2	Tyrosine-protein kinase. (1129 aa)
	ENSCSEP00000004622	Si:ch73-194h10.2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2018 aa)
	FARP1	FERM, ARH/RhoGEF and pleckstrin domain protein 1. (1024 aa)
	fermt2	Fermitin family member 2. (695 aa)
	Tln2	Talin 2b. (2554 aa)
	ptpn21	Protein tyrosine phosphatase non-receptor type 21. (1212 aa)
	LOC103388446	Protein tyrosine kinase 2ab; Belongs to the protein kinase superfamily. Tyr protein kinase family. (897 aa)
	frmd7	FERM domain-containing protein. (805 aa)
	LOC103387271	FERM domain-containing protein. (632 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000002456	ENSCSEP00000013470	ENSCSEP00000002456	ENSCSEP00000013470	Erythrocyte membrane protein band 4.1 like 4B.	FERM domain-containing protein.	0.420
ENSCSEP00000002456	ENSCSEP00000023745	ENSCSEP00000002456	ENSCSEP00000023745	Erythrocyte membrane protein band 4.1 like 4B.	FERM domain-containing protein.	0.420
ENSCSEP00000002456	LOC103384971	ENSCSEP00000002456	ENSCSEP00000008499	Erythrocyte membrane protein band 4.1 like 4B.	Si:dkey-178k16.1.	0.420
ENSCSEP00000002456	LOC103388490	ENSCSEP00000002456	ENSCSEP00000011832	Erythrocyte membrane protein band 4.1 like 4B.	FERM domain-containing protein.	0.420
ENSCSEP00000002456	epb41	ENSCSEP00000002456	ENSCSEP00000010297	Erythrocyte membrane protein band 4.1 like 4B.	Erythrocyte membrane protein band 4.1a.	0.420
ENSCSEP00000002456	epb41l2	ENSCSEP00000002456	ENSCSEP00000030000	Erythrocyte membrane protein band 4.1 like 4B.	Erythrocyte membrane protein band 4.1 like 2.	0.420
ENSCSEP00000002456	epb41l3	ENSCSEP00000002456	ENSCSEP00000025556	Erythrocyte membrane protein band 4.1 like 4B.	Erythrocyte membrane protein band 4.1-like 3b.	0.420
ENSCSEP00000013470	ENSCSEP00000002456	ENSCSEP00000013470	ENSCSEP00000002456	FERM domain-containing protein.	Erythrocyte membrane protein band 4.1 like 4B.	0.420
ENSCSEP00000013470	ENSCSEP00000028371	ENSCSEP00000013470	ENSCSEP00000028371	FERM domain-containing protein.	Erythrocyte membrane protein band 4.1 like 5.	0.420
ENSCSEP00000018143	ENSCSEP00000020197	ENSCSEP00000018143	ENSCSEP00000020197	Talin 2a.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.534
ENSCSEP00000018143	LOC103388446	ENSCSEP00000018143	ENSCSEP00000007901	Talin 2a.	Protein tyrosine kinase 2ab; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.534
ENSCSEP00000018143	LOC103389360	ENSCSEP00000018143	ENSCSEP00000003468	Talin 2a.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.534
ENSCSEP00000018143	LOC103398680	ENSCSEP00000018143	ENSCSEP00000021432	Talin 2a.	Protein tyrosine kinase 2 beta, b; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.534
ENSCSEP00000020197	ENSCSEP00000018143	ENSCSEP00000020197	ENSCSEP00000018143	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Talin 2a.	0.534
ENSCSEP00000020197	LOC103395797	ENSCSEP00000020197	ENSCSEP00000028843	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Tyrosine-protein kinase.	0.507
ENSCSEP00000020197	LOC103397589	ENSCSEP00000020197	ENSCSEP00000025896	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Tyrosine-protein kinase.	0.507
ENSCSEP00000020197	Tln2	ENSCSEP00000020197	ENSCSEP00000005103	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Talin 2b.	0.534
ENSCSEP00000020197	jak1	ENSCSEP00000020197	ENSCSEP00000027870	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Tyrosine-protein kinase.	0.507
ENSCSEP00000020197	jak2	ENSCSEP00000020197	ENSCSEP00000027404	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Tyrosine-protein kinase.	0.507
ENSCSEP00000020197	tln1	ENSCSEP00000020197	ENSCSEP00000029164	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Talin 1.	0.632