31 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	rfc4	Replication factor C (activator 1) 4. (358 aa)
	meiob	Methionine sulfoxide reductase B1b. (436 aa)
	Polh	Polymerase (DNA directed), eta. (294 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	nploc4	NPL4 homolog, ubiquitin recognition factor. (627 aa)
	sprtn	SprT-like N-terminal domain. (528 aa)
	SPATA5	Spermatogenesis associated 5. (886 aa)
	RCBTB1	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (637 aa)
	rfc1	Replication factor C subunit 1. (1083 aa)
	kxd1	KxDL motif containing 1. (180 aa)
	ENSCSEP00000009964	Uncharacterized protein. (85 aa)
	rfc5	Replication factor C (activator 1) 5. (338 aa)
	rcbtb2	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (554 aa)
	ENSCSEP00000011696	Uncharacterized protein. (103 aa)
	ENSCSEP00000015632	Ring finger and CHY zinc finger domain containing 1. (277 aa)
	LOC103397105	Uncharacterized protein; Belongs to the AAA ATPase family. (806 aa)
	rfc3	Replication factor C (activator 1) 3. (356 aa)
	spata5l1	Spermatogenesis associated 5-like 1. (748 aa)
	LOC103395242	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (633 aa)
	ENSCSEP00000020096	Uncharacterized protein. (707 aa)
	rpa1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
	LOC103379434	Si:dkey-24l11.2. (653 aa)
	LOC103398200	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	ENSCSEP00000023759	Ubiquitin-like domain-containing protein. (92 aa)
	UBB	Ubiquitin B. (744 aa)
	ufd1	Uncharacterized protein. (297 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (151 aa)
	rpa2	Replication protein A2. (274 aa)
	rfc2	Replication factor C (activator 1) 2. (355 aa)
	LOC103398999	Ubiquitin recognition factor in ER associated degradation 1. (311 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000009964	ENSCSEP00000011696	ENSCSEP00000009964	ENSCSEP00000011696	Uncharacterized protein.	Uncharacterized protein.	0.734
ENSCSEP00000009964	ENSCSEP00000020096	ENSCSEP00000009964	ENSCSEP00000020096	Uncharacterized protein.	Uncharacterized protein.	0.647
ENSCSEP00000009964	LOC103395242	ENSCSEP00000009964	ENSCSEP00000019947	Uncharacterized protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.973
ENSCSEP00000009964	Polh	ENSCSEP00000009964	ENSCSEP00000001349	Uncharacterized protein.	Polymerase (DNA directed), eta.	0.650
ENSCSEP00000009964	UBB	ENSCSEP00000009964	ENSCSEP00000025180	Uncharacterized protein.	Ubiquitin B.	0.653
ENSCSEP00000009964	meiob	ENSCSEP00000009964	ENSCSEP00000001347	Uncharacterized protein.	Methionine sulfoxide reductase B1b.	0.962
ENSCSEP00000009964	pcna	ENSCSEP00000009964	ENSCSEP00000030429	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.728
ENSCSEP00000009964	rfc1	ENSCSEP00000009964	ENSCSEP00000007615	Uncharacterized protein.	Replication factor C subunit 1.	0.692
ENSCSEP00000009964	rfc2	ENSCSEP00000009964	ENSCSEP00000029824	Uncharacterized protein.	Replication factor C (activator 1) 2.	0.832
ENSCSEP00000009964	rfc3	ENSCSEP00000009964	ENSCSEP00000019462	Uncharacterized protein.	Replication factor C (activator 1) 3.	0.752
ENSCSEP00000009964	rfc4	ENSCSEP00000009964	ENSCSEP00000000657	Uncharacterized protein.	Replication factor C (activator 1) 4.	0.882
ENSCSEP00000009964	rfc5	ENSCSEP00000009964	ENSCSEP00000032718	Uncharacterized protein.	Replication factor C (activator 1) 5.	0.734
ENSCSEP00000009964	rpa1	ENSCSEP00000009964	ENSCSEP00000020488	Uncharacterized protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.973
ENSCSEP00000009964	rpa2	ENSCSEP00000009964	ENSCSEP00000029823	Uncharacterized protein.	Replication protein A2.	0.936
ENSCSEP00000009964	rps27a	ENSCSEP00000009964	ENSCSEP00000002392	Uncharacterized protein.	Ribosomal protein S27a.	0.684
ENSCSEP00000009964	sprtn	ENSCSEP00000009964	ENSCSEP00000004935	Uncharacterized protein.	SprT-like N-terminal domain.	0.669
ENSCSEP00000011696	ENSCSEP00000009964	ENSCSEP00000011696	ENSCSEP00000009964	Uncharacterized protein.	Uncharacterized protein.	0.734
ENSCSEP00000011696	ENSCSEP00000015632	ENSCSEP00000011696	ENSCSEP00000015632	Uncharacterized protein.	Ring finger and CHY zinc finger domain containing 1.	0.606
ENSCSEP00000011696	ENSCSEP00000020096	ENSCSEP00000011696	ENSCSEP00000020096	Uncharacterized protein.	Uncharacterized protein.	0.964
ENSCSEP00000011696	LOC103379434	ENSCSEP00000011696	ENSCSEP00000020806	Uncharacterized protein.	Si:dkey-24l11.2.	0.502