13 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	polr2b	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
	nelfa	Negative elongation factor complex member A. (591 aa)
	ENSCSEP00000001342	Uncharacterized protein. (371 aa)
	polr2f	Polymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
	LOC103389682	Cyclin T2b; Belongs to the cyclin family. (542 aa)
	rtf1	RTF1 homolog, Paf1/RNA polymerase II complex component. (677 aa)
	LOC103392679	Elongin B. (132 aa)
	CCNT2	Cyclin T2; Belongs to the cyclin family. (723 aa)
	gtf2h4	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (461 aa)
	NCBP1	Nuclear cap binding protein subunit 1. (822 aa)
	nelfe	Negative elongation factor complex member E. (340 aa)
	cdk9	Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. (393 aa)
	elob	Ubiquitin-like domain-containing protein. (119 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCNT2	ENSCSEP00000001342	ENSCSEP00000029700	ENSCSEP00000001342	Cyclin T2; Belongs to the cyclin family.	Uncharacterized protein.	0.860
CCNT2	LOC103389682	ENSCSEP00000029700	ENSCSEP00000014253	Cyclin T2; Belongs to the cyclin family.	Cyclin T2b; Belongs to the cyclin family.	0.635
CCNT2	LOC103392679	ENSCSEP00000029700	ENSCSEP00000033697	Cyclin T2; Belongs to the cyclin family.	Elongin B.	0.564
CCNT2	NCBP1	ENSCSEP00000029700	ENSCSEP00000019395	Cyclin T2; Belongs to the cyclin family.	Nuclear cap binding protein subunit 1.	0.669
CCNT2	cdk9	ENSCSEP00000029700	ENSCSEP00000015411	Cyclin T2; Belongs to the cyclin family.	Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.	0.969
CCNT2	elob	ENSCSEP00000029700	ENSCSEP00000014584	Cyclin T2; Belongs to the cyclin family.	Ubiquitin-like domain-containing protein.	0.564
CCNT2	gtf2h4	ENSCSEP00000029700	ENSCSEP00000029297	Cyclin T2; Belongs to the cyclin family.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.519
CCNT2	nelfa	ENSCSEP00000029700	ENSCSEP00000006417	Cyclin T2; Belongs to the cyclin family.	Negative elongation factor complex member A.	0.625
CCNT2	nelfe	ENSCSEP00000029700	ENSCSEP00000017683	Cyclin T2; Belongs to the cyclin family.	Negative elongation factor complex member E.	0.782
CCNT2	polr2b	ENSCSEP00000029700	ENSCSEP00000008316	Cyclin T2; Belongs to the cyclin family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.670
CCNT2	polr2f	ENSCSEP00000029700	ENSCSEP00000010669	Cyclin T2; Belongs to the cyclin family.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.721
ENSCSEP00000001342	CCNT2	ENSCSEP00000001342	ENSCSEP00000029700	Uncharacterized protein.	Cyclin T2; Belongs to the cyclin family.	0.860
ENSCSEP00000001342	LOC103389682	ENSCSEP00000001342	ENSCSEP00000014253	Uncharacterized protein.	Cyclin T2b; Belongs to the cyclin family.	0.665
ENSCSEP00000001342	LOC103392679	ENSCSEP00000001342	ENSCSEP00000033697	Uncharacterized protein.	Elongin B.	0.485
ENSCSEP00000001342	NCBP1	ENSCSEP00000001342	ENSCSEP00000019395	Uncharacterized protein.	Nuclear cap binding protein subunit 1.	0.516
ENSCSEP00000001342	cdk9	ENSCSEP00000001342	ENSCSEP00000015411	Uncharacterized protein.	Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.	0.969
ENSCSEP00000001342	elob	ENSCSEP00000001342	ENSCSEP00000014584	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.485
ENSCSEP00000001342	nelfa	ENSCSEP00000001342	ENSCSEP00000006417	Uncharacterized protein.	Negative elongation factor complex member A.	0.632
ENSCSEP00000001342	nelfe	ENSCSEP00000001342	ENSCSEP00000017683	Uncharacterized protein.	Negative elongation factor complex member E.	0.677
ENSCSEP00000001342	polr2b	ENSCSEP00000001342	ENSCSEP00000008316	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.677