27 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	lrba	LPS-responsive vesicle trafficking, beach and anchor containing. (2700 aa)
	dner	Delta/notch-like EGF repeat containing. (768 aa)
	LOC103384498	Hairy-related 12. (164 aa)
	LOC103386711	E3 ubiquitin-protein ligase. (920 aa)
	DTX1	Deltex E3 ubiquitin ligase 1. (637 aa)
	hey1	Hes-related family bHLH transcription factor with YRPW motif 1. (338 aa)
	ENSCSEP00000027085	BHLH domain-containing protein. (73 aa)
	ENSCSEP00000027077	Uncharacterized protein. (221 aa)
	UBB	Ubiquitin B. (744 aa)
	LOC103387639	Uncharacterized protein. (579 aa)
	maml3	Mastermind-like transcriptional coactivator 3. (1179 aa)
	hes1	Hairy-related 6. (317 aa)
	neurl1b	Neuralized E3 ubiquitin protein ligase 1B. (595 aa)
	mib1	Mindbomb E3 ubiquitin protein ligase 1. (1041 aa)
	nbea	Neurobeachin a. (2440 aa)
	NEURL1	Neuralized E3 ubiquitin protein ligase 1. (535 aa)
	LOC103395161	Deltex 2, E3 ubiquitin ligase. (668 aa)
	LOC103394648	Hes related family bHLH transcription factor with YRPW motif like. (333 aa)
	LOC103383968	Uncharacterized protein. (754 aa)
	hes4	Hairy-related 9. (293 aa)
	ENSCSEP00000008368	Uncharacterized protein. (297 aa)
	LOC103388387	Uncharacterized protein. (395 aa)
	ENSCSEP00000005512	E3 ubiquitin-protein ligase. (783 aa)
	DLK1	Delta like non-canonical Notch ligand 1. (482 aa)
	LOC103387016	Deltex 4, E3 ubiquitin ligase a. (872 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	LOC103390439	Notch receptor 1a. (2364 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DLK1	LOC103390439	ENSCSEP00000004113	ENSCSEP00000002011	Delta like non-canonical Notch ligand 1.	Notch receptor 1a.	0.663
DTX1	ENSCSEP00000005512	ENSCSEP00000028377	ENSCSEP00000005512	Deltex E3 ubiquitin ligase 1.	E3 ubiquitin-protein ligase.	0.617
DTX1	LOC103386711	ENSCSEP00000028377	ENSCSEP00000029693	Deltex E3 ubiquitin ligase 1.	E3 ubiquitin-protein ligase.	0.617
DTX1	LOC103390439	ENSCSEP00000028377	ENSCSEP00000002011	Deltex E3 ubiquitin ligase 1.	Notch receptor 1a.	0.565
DTX1	UBB	ENSCSEP00000028377	ENSCSEP00000025180	Deltex E3 ubiquitin ligase 1.	Ubiquitin B.	0.569
DTX1	rps27a	ENSCSEP00000028377	ENSCSEP00000002392	Deltex E3 ubiquitin ligase 1.	Ribosomal protein S27a.	0.597
ENSCSEP00000005512	DTX1	ENSCSEP00000005512	ENSCSEP00000028377	E3 ubiquitin-protein ligase.	Deltex E3 ubiquitin ligase 1.	0.617
ENSCSEP00000005512	LOC103383968	ENSCSEP00000005512	ENSCSEP00000012845	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.617
ENSCSEP00000005512	LOC103387016	ENSCSEP00000005512	ENSCSEP00000003780	E3 ubiquitin-protein ligase.	Deltex 4, E3 ubiquitin ligase a.	0.617
ENSCSEP00000005512	LOC103395161	ENSCSEP00000005512	ENSCSEP00000016586	E3 ubiquitin-protein ligase.	Deltex 2, E3 ubiquitin ligase.	0.617
ENSCSEP00000005512	UBB	ENSCSEP00000005512	ENSCSEP00000025180	E3 ubiquitin-protein ligase.	Ubiquitin B.	0.890
ENSCSEP00000005512	rps27a	ENSCSEP00000005512	ENSCSEP00000002392	E3 ubiquitin-protein ligase.	Ribosomal protein S27a.	0.909
ENSCSEP00000027077	hes1	ENSCSEP00000027077	ENSCSEP00000022389	Uncharacterized protein.	Hairy-related 6.	0.902
ENSCSEP00000027077	hes4	ENSCSEP00000027077	ENSCSEP00000009996	Uncharacterized protein.	Hairy-related 9.	0.902
ENSCSEP00000027085	LOC103390439	ENSCSEP00000027085	ENSCSEP00000002011	BHLH domain-containing protein.	Notch receptor 1a.	0.428
LOC103383968	ENSCSEP00000005512	ENSCSEP00000012845	ENSCSEP00000005512	Uncharacterized protein.	E3 ubiquitin-protein ligase.	0.617
LOC103383968	LOC103386711	ENSCSEP00000012845	ENSCSEP00000029693	Uncharacterized protein.	E3 ubiquitin-protein ligase.	0.617
LOC103383968	LOC103390439	ENSCSEP00000012845	ENSCSEP00000002011	Uncharacterized protein.	Notch receptor 1a.	0.553
LOC103383968	UBB	ENSCSEP00000012845	ENSCSEP00000025180	Uncharacterized protein.	Ubiquitin B.	0.554
LOC103383968	rps27a	ENSCSEP00000012845	ENSCSEP00000002392	Uncharacterized protein.	Ribosomal protein S27a.	0.597