15 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ikbkb	Inhibitor of nuclear factor kappa B kinase subunit beta. (743 aa)
	LOC103377625	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b. (332 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	traf6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (576 aa)
	sqstm1	Sequestosome 1. (427 aa)
	ENSCSEP00000013874	Nerve growth factor receptor b. (406 aa)
	ENSCSEP00000016086	GSAP-16 domain-containing protein. (168 aa)
	ENSCSEP00000023759	Ubiquitin-like domain-containing protein. (92 aa)
	LOC103386552	Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family. (202 aa)
	UBB	Ubiquitin B. (744 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (151 aa)
	irak1	Interleukin-1 receptor-associated kinase 1. (692 aa)
	ENSCSEP00000028793	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family. (225 aa)
	LOC103380734	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (308 aa)
	Ngfr	Nerve growth factor receptor a (TNFR superfamily, member 16). (411 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000013874	ENSCSEP00000016086	ENSCSEP00000013874	ENSCSEP00000016086	Nerve growth factor receptor b.	GSAP-16 domain-containing protein.	0.474
ENSCSEP00000013874	ENSCSEP00000028793	ENSCSEP00000013874	ENSCSEP00000028793	Nerve growth factor receptor b.	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	0.960
ENSCSEP00000013874	ikbkb	ENSCSEP00000013874	ENSCSEP00000030949	Nerve growth factor receptor b.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.487
ENSCSEP00000013874	irak1	ENSCSEP00000013874	ENSCSEP00000027065	Nerve growth factor receptor b.	Interleukin-1 receptor-associated kinase 1.	0.685
ENSCSEP00000013874	sqstm1	ENSCSEP00000013874	ENSCSEP00000008395	Nerve growth factor receptor b.	Sequestosome 1.	0.557
ENSCSEP00000013874	traf6	ENSCSEP00000013874	ENSCSEP00000004790	Nerve growth factor receptor b.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.814
ENSCSEP00000016086	ENSCSEP00000013874	ENSCSEP00000016086	ENSCSEP00000013874	GSAP-16 domain-containing protein.	Nerve growth factor receptor b.	0.474
ENSCSEP00000016086	ENSCSEP00000023759	ENSCSEP00000016086	ENSCSEP00000023759	GSAP-16 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.668
ENSCSEP00000016086	Ngfr	ENSCSEP00000016086	ENSCSEP00000033535	GSAP-16 domain-containing protein.	Nerve growth factor receptor a (TNFR superfamily, member 16).	0.474
ENSCSEP00000016086	UBB	ENSCSEP00000016086	ENSCSEP00000025180	GSAP-16 domain-containing protein.	Ubiquitin B.	0.932
ENSCSEP00000016086	ikbkb	ENSCSEP00000016086	ENSCSEP00000030949	GSAP-16 domain-containing protein.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.577
ENSCSEP00000016086	irak1	ENSCSEP00000016086	ENSCSEP00000027065	GSAP-16 domain-containing protein.	Interleukin-1 receptor-associated kinase 1.	0.683
ENSCSEP00000016086	rps27a	ENSCSEP00000016086	ENSCSEP00000002392	GSAP-16 domain-containing protein.	Ribosomal protein S27a.	0.828
ENSCSEP00000016086	traf6	ENSCSEP00000016086	ENSCSEP00000004790	GSAP-16 domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.961
ENSCSEP00000016086	uba52	ENSCSEP00000016086	ENSCSEP00000025345	GSAP-16 domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.668
ENSCSEP00000023759	ENSCSEP00000016086	ENSCSEP00000023759	ENSCSEP00000016086	Ubiquitin-like domain-containing protein.	GSAP-16 domain-containing protein.	0.668
ENSCSEP00000023759	LOC103377625	ENSCSEP00000023759	ENSCSEP00000000075	Ubiquitin-like domain-containing protein.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.759
ENSCSEP00000023759	LOC103380734	ENSCSEP00000023759	ENSCSEP00000029838	Ubiquitin-like domain-containing protein.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	0.759
ENSCSEP00000023759	UBB	ENSCSEP00000023759	ENSCSEP00000025180	Ubiquitin-like domain-containing protein.	Ubiquitin B.	0.961
ENSCSEP00000023759	ikbkb	ENSCSEP00000023759	ENSCSEP00000030949	Ubiquitin-like domain-containing protein.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.605