STRINGSTRING
LOC103393291 LOC103393291 cetn3 cetn3 nup88 nup88 brca1 brca1 ENSCSEP00000011692 ENSCSEP00000011692 bmi1 bmi1 nup58 nup58 LOC103395080 LOC103395080 Rnf168 Rnf168 nsmce2 nsmce2 LOC103388613 LOC103388613 LOC103379069 LOC103379069 ENSCSEP00000016477 ENSCSEP00000016477 RING1 RING1 ENSCSEP00000028522 ENSCSEP00000028522 SCMH1 SCMH1 LOC103391381 LOC103391381 ENSCSEP00000031202 ENSCSEP00000031202 ENSCSEP00000031221 ENSCSEP00000031221 phc1 phc1 LOC103385399 LOC103385399 parp1 parp1 smc6 smc6 LOC103393067 LOC103393067 LOC103393068 LOC103393068 ENSCSEP00000033464 ENSCSEP00000033464 nup188 nup188 LOC103384236 LOC103384236 LOC103384237 LOC103384237 rnf2 rnf2 nup93 nup93 nup133 nup133 RAD21 RAD21 LOC103392195 LOC103392195 ENSCSEP00000018043 ENSCSEP00000018043 LOC103387539 LOC103387539 smc3 smc3 Xrcc4 Xrcc4 ube2i ube2i nsmce1 nsmce1 nup85 nup85 sumo2 sumo2 LOC103395242 LOC103395242 rpa1 rpa1 LOC103392282 LOC103392282 seh1l seh1l blm blm nup42 nup42 ENSCSEP00000023236 ENSCSEP00000023236 ENSCSEP00000023384 ENSCSEP00000023384 nup160 nup160 nup210 nup210 smc5 smc5 CBX2 CBX2 LOC103383557 LOC103383557 LOC103378402 LOC103378402 Stag3 Stag3 nup43 nup43 STAG1 STAG1 nup107 nup107 nup205 nup205 LOC103379368 LOC103379368 nup50 nup50 LOC103390697 LOC103390697 nup37 nup37 rae1 rae1 sumo1 sumo1 pias4 pias4 Rnf169 Rnf169 xpc xpc Rad52 Rad52 nup98 nup98 ENSCSEP00000025414 ENSCSEP00000025414 pcgf2 pcgf2 ENSCSEP00000026221 ENSCSEP00000026221 Nup155 Nup155 LOC103398851 LOC103398851 Tpr Tpr LOC103396557 LOC103396557 LOC103379812 LOC103379812 meiob meiob nup35 nup35 smc1a smc1a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103393291Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
cetn3Uncharacterized protein. (170 aa)
nup88Nucleoporin 88. (474 aa)
brca1Uncharacterized protein. (1217 aa)
ENSCSEP00000011692Ubiquitin-like domain-containing protein. (102 aa)
bmi1RAWUL domain-containing protein. (144 aa)
nup58Nucleoporin 58. (592 aa)
LOC103395080POM121 transmembrane nucleoporin. (1185 aa)
Rnf168RING-type domain-containing protein. (117 aa)
nsmce2NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase. (230 aa)
LOC103388613RAD21 cohesin complex component a. (639 aa)
LOC103379069Scm polycomb group protein like 2. (683 aa)
ENSCSEP00000016477Rad60-SLD domain-containing protein. (141 aa)
RING1Ring finger protein 1. (366 aa)
ENSCSEP00000028522Uncharacterized protein. (457 aa)
SCMH1Scm polycomb group protein homolog 1. (625 aa)
LOC103391381Stromal antigen 2b. (1160 aa)
ENSCSEP00000031202Stromal antigen 2a. (1195 aa)
ENSCSEP00000031221Uncharacterized protein. (112 aa)
phc1Polyhomeotic homolog 1. (737 aa)
LOC103385399RAD21 cohesin complex component like 1. (440 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1015 aa)
smc6Si:dkey-119f1.1. (1092 aa)
LOC103393067Chromobox homolog 4 (Pc class homolog, Drosophila). (565 aa)
LOC103393068Chromobox homolog 8a (Pc class homolog, Drosophila). (363 aa)
ENSCSEP00000033464Achalasia, adrenocortical insufficiency, alacrimia. (399 aa)
nup188Nucleoporin 188. (1748 aa)
LOC103384236Chromobox homolog 8b. (378 aa)
LOC103384237Chromobox 4. (577 aa)
rnf2Ring finger protein 2. (343 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (826 aa)
nup133Nucleoporin 133. (1151 aa)
RAD21RAD21 cohesin complex component. (626 aa)
LOC103392195Small ubiquitin-related modifier. (100 aa)
ENSCSEP00000018043Uncharacterized protein. (77 aa)
LOC103387539Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (346 aa)
smc3Structural maintenance of chromosomes 3. (1169 aa)
Xrcc4Uncharacterized protein. (164 aa)
ube2iUbiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
nsmce1NSE1 homolog, SMC5-SMC6 complex component. (263 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (652 aa)
sumo2Ubiquitin-like domain-containing protein. (149 aa)
LOC103395242Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (633 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
LOC103392282RAN binding protein 2. (3022 aa)
seh1lSEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (383 aa)
blmBLM RecQ like helicase. (1300 aa)
nup42Nucleoporin 42. (434 aa)
ENSCSEP00000023236RecQ helicase-like 4. (807 aa)
ENSCSEP00000023384Uncharacterized protein. (94 aa)
nup160Nucleoporin 160. (1083 aa)
nup210Nucleoporin 210. (1835 aa)
smc5Structural maintenance of chromosomes 5. (1040 aa)
CBX2Chromobox 2. (410 aa)
LOC103383557Small ubiquitin-related modifier. (96 aa)
LOC103378402Small ubiquitin-related modifier. (94 aa)
Stag3SCD domain-containing protein. (116 aa)
nup43Nucleoporin 43. (346 aa)
STAG1Stromal antigen 1a. (1076 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (884 aa)
nup205Nucleoporin 205. (1991 aa)
LOC103379368Uncharacterized protein. (166 aa)
nup50Nucleoporin 50. (508 aa)
LOC103390697Centrin 4. (217 aa)
nup37Nucleoporin 37. (364 aa)
rae1Ribonucleic acid export 1. (368 aa)
sumo1Small ubiquitin-related modifier. (101 aa)
pias4Protein inhibitor of activated STAT, 4a. (499 aa)
Rnf169Ring finger protein 169. (665 aa)
xpcXeroderma pigmentosum, complementation group C. (924 aa)
Rad52Uncharacterized protein. (99 aa)
nup98Nucleoporin 98. (1838 aa)
ENSCSEP00000025414Uncharacterized protein. (129 aa)
pcgf2Polycomb group ring finger 2. (333 aa)
ENSCSEP00000026221Uncharacterized protein. (78 aa)
Nup155Nucleoporin 155. (1174 aa)
LOC103398851Potassium channel tetramerization domain containing 2. (237 aa)
TprTranslocated promoter region b, nuclear basket protein. (2370 aa)
LOC103396557Translocated promoter region a, nuclear basket protein. (2514 aa)
LOC103379812Thymine DNA glycosylase, tandem duplicate 1. (456 aa)
meiobMethionine sulfoxide reductase B1b. (436 aa)
nup35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (298 aa)
smc1aStructural maintenance of chromosomes protein. (1254 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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