STRINGSTRING
ENSCSEP00000023759 ENSCSEP00000023759 rps27a rps27a LOC103387016 LOC103387016 tbk1 tbk1 trim13 trim13 LOC103383968 LOC103383968 DDX41 DDX41 UBB UBB uba52 uba52 trim32 trim32 ENSCSEP00000028832 ENSCSEP00000028832 LOC103382011 LOC103382011
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSCSEP00000023759Ubiquitin-like domain-containing protein. (92 aa)
rps27aRibosomal protein S27a. (156 aa)
LOC103387016Deltex 4, E3 ubiquitin ligase a. (872 aa)
tbk1TANK-binding kinase 1. (711 aa)
trim13Tripartite motif containing 13. (430 aa)
LOC103383968Uncharacterized protein. (754 aa)
DDX41DEAD-box helicase 41. (603 aa)
UBBUbiquitin B. (744 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (151 aa)
trim32Tripartite motif containing 32. (682 aa)
ENSCSEP00000028832IRF tryptophan pentad repeat domain-containing protein. (104 aa)
LOC103382011Interferon regulatory factor 3. (453 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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