41 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nup35	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (298 aa)
	topors	Topoisomerase I binding, arginine/serine-rich a. (823 aa)
	LOC103383557	Small ubiquitin-related modifier. (96 aa)
	LOC103378402	Small ubiquitin-related modifier. (94 aa)
	nup43	Nucleoporin 43. (346 aa)
	nup107	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (884 aa)
	nup205	Nucleoporin 205. (1991 aa)
	nup50	Nucleoporin 50. (508 aa)
	nup37	Nucleoporin 37. (364 aa)
	rae1	Ribonucleic acid export 1. (368 aa)
	ENSCSEP00000008284	RING-type domain-containing protein. (1113 aa)
	NUP62	Nucleoporin 62. (561 aa)
	sumo1	Small ubiquitin-related modifier. (101 aa)
	pias4	Protein inhibitor of activated STAT, 4a. (499 aa)
	LOC103393291	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	nup98	Nucleoporin 98. (1838 aa)
	nup88	Nucleoporin 88. (474 aa)
	ENSCSEP00000011692	Ubiquitin-like domain-containing protein. (102 aa)
	nup58	Nucleoporin 58. (592 aa)
	LOC103395080	POM121 transmembrane nucleoporin. (1185 aa)
	nup133	Nucleoporin 133. (1151 aa)
	LOC103392195	Small ubiquitin-related modifier. (100 aa)
	ube2i	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	nup85	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (652 aa)
	sumo2	Ubiquitin-like domain-containing protein. (149 aa)
	LOC103392282	RAN binding protein 2. (3022 aa)
	seh1l	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (383 aa)
	nup42	Nucleoporin 42. (434 aa)
	nup188	Nucleoporin 188. (1748 aa)
	ranbp3	RAN binding protein 3b. (517 aa)
	Ndc1	NDC1 transmembrane nucleoporin. (654 aa)
	ENSCSEP00000026221	Uncharacterized protein. (78 aa)
	Nup155	Nucleoporin 155. (1174 aa)
	LOC103398851	Potassium channel tetramerization domain containing 2. (237 aa)
	Tpr	Translocated promoter region b, nuclear basket protein. (2370 aa)
	LOC103396557	Translocated promoter region a, nuclear basket protein. (2514 aa)
	sec13	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)
	nup93	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (826 aa)
	nup210	Nucleoporin 210. (1835 aa)
	nup160	Nucleoporin 160. (1083 aa)
	ENSCSEP00000033464	Achalasia, adrenocortical insufficiency, alacrimia. (399 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000008284	ENSCSEP00000011692	ENSCSEP00000008284	ENSCSEP00000011692	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.528
ENSCSEP00000008284	LOC103378402	ENSCSEP00000008284	ENSCSEP00000004643	RING-type domain-containing protein.	Small ubiquitin-related modifier.	0.528
ENSCSEP00000008284	LOC103383557	ENSCSEP00000008284	ENSCSEP00000004585	RING-type domain-containing protein.	Small ubiquitin-related modifier.	0.528
ENSCSEP00000008284	LOC103392195	ENSCSEP00000008284	ENSCSEP00000017973	RING-type domain-containing protein.	Small ubiquitin-related modifier.	0.528
ENSCSEP00000008284	LOC103393291	ENSCSEP00000008284	ENSCSEP00000009731	RING-type domain-containing protein.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.659
ENSCSEP00000008284	LOC103398851	ENSCSEP00000008284	ENSCSEP00000026699	RING-type domain-containing protein.	Potassium channel tetramerization domain containing 2.	0.623
ENSCSEP00000008284	sumo1	ENSCSEP00000008284	ENSCSEP00000008829	RING-type domain-containing protein.	Small ubiquitin-related modifier.	0.689
ENSCSEP00000008284	sumo2	ENSCSEP00000008284	ENSCSEP00000019858	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.528
ENSCSEP00000008284	ube2i	ENSCSEP00000008284	ENSCSEP00000019176	RING-type domain-containing protein.	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.	0.659
ENSCSEP00000011692	ENSCSEP00000008284	ENSCSEP00000011692	ENSCSEP00000008284	Ubiquitin-like domain-containing protein.	RING-type domain-containing protein.	0.528
ENSCSEP00000011692	ENSCSEP00000026221	ENSCSEP00000011692	ENSCSEP00000026221	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.420
ENSCSEP00000011692	LOC103392282	ENSCSEP00000011692	ENSCSEP00000020800	Ubiquitin-like domain-containing protein.	RAN binding protein 2.	0.923
ENSCSEP00000011692	LOC103393291	ENSCSEP00000011692	ENSCSEP00000009731	Ubiquitin-like domain-containing protein.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.825
ENSCSEP00000011692	LOC103396557	ENSCSEP00000011692	ENSCSEP00000028333	Ubiquitin-like domain-containing protein.	Translocated promoter region a, nuclear basket protein.	0.491
ENSCSEP00000011692	LOC103398851	ENSCSEP00000011692	ENSCSEP00000026699	Ubiquitin-like domain-containing protein.	Potassium channel tetramerization domain containing 2.	0.785
ENSCSEP00000011692	NUP62	ENSCSEP00000011692	ENSCSEP00000008510	Ubiquitin-like domain-containing protein.	Nucleoporin 62.	0.470
ENSCSEP00000011692	Nup155	ENSCSEP00000011692	ENSCSEP00000026262	Ubiquitin-like domain-containing protein.	Nucleoporin 155.	0.420
ENSCSEP00000011692	Tpr	ENSCSEP00000011692	ENSCSEP00000026831	Ubiquitin-like domain-containing protein.	Translocated promoter region b, nuclear basket protein.	0.491
ENSCSEP00000011692	nup107	ENSCSEP00000011692	ENSCSEP00000005381	Ubiquitin-like domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.552
ENSCSEP00000011692	nup133	ENSCSEP00000011692	ENSCSEP00000016737	Ubiquitin-like domain-containing protein.	Nucleoporin 133.	0.546