STRINGSTRING
LOC103387066 LOC103387066 exosc3 exosc3 exosc5 exosc5 exosc1 exosc1 dis3l dis3l LOC103397975 LOC103397975 LOC103383890 LOC103383890 exosc4 exosc4 exosc7 exosc7 khsrp khsrp parn parn exosc9 exosc9 LOC103390172 LOC103390172 ENSCSEP00000025902 ENSCSEP00000025902 dcp2 dcp2 FUBP3 FUBP3 dis3l2 dis3l2 exosc8 exosc8 fubp1 fubp1 toe1 toe1 exosc6 exosc6 dis3 dis3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103387066Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (476 aa)
exosc3Exosome component 3. (244 aa)
exosc5Exosome component 5. (219 aa)
exosc1Exosome component 1. (175 aa)
dis3lDIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (1047 aa)
LOC103397975Uncharacterized protein. (536 aa)
LOC103383890V-akt murine thymoma viral oncogene homolog 3b; Belongs to the protein kinase superfamily. (484 aa)
exosc4Exosome component 4. (245 aa)
exosc7Exosome component 7. (291 aa)
khsrpKH-type splicing regulatory protein. (617 aa)
parnPoly(A)-specific ribonuclease (deadenylation nuclease). (692 aa)
exosc9Exosome component 9. (400 aa)
LOC103390172Exosome component 2. (291 aa)
ENSCSEP00000025902Exosome component 2. (135 aa)
dcp2Decapping mRNA 2. (390 aa)
FUBP3Far upstream element binding protein 3. (573 aa)
dis3l2DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. (1034 aa)
exosc8Exosome component 8. (277 aa)
fubp1Far upstream element (FUSE) binding protein 1. (640 aa)
toe1Target of EGR1, exonuclease. (527 aa)
exosc6Exosome component 6. (270 aa)
dis3DIS3 exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (948 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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