STRINGSTRING
nup35 nup35 NUP54 NUP54 ENSCSEP00000033464 ENSCSEP00000033464 nup160 nup160 nup210 nup210 nup153 nup153 LOC103396557 LOC103396557 RING1 RING1 sec13 sec13 phc1 phc1 rnf2 rnf2 nup93 nup93 nup188 nup188 ENSCSEP00000023513 ENSCSEP00000023513 ENSCSEP00000023499 ENSCSEP00000023499 LOC103384236 LOC103384236 ENSCSEP00000023079 ENSCSEP00000023079 HIST1H4J HIST1H4J nup42 nup42 seh1l seh1l suz12 suz12 nup85 nup85 LOC103392902 LOC103392902 ube2i ube2i Zbed4 Zbed4 LOC103394134 LOC103394134 ENSCSEP00000018043 ENSCSEP00000018043 LOC103392195 LOC103392195 nup133 nup133 ENSCSEP00000016477 ENSCSEP00000016477 ENSCSEP00000014019 ENSCSEP00000014019 LOC103395080 LOC103395080 nup58 nup58 bmi1 bmi1 ENSCSEP00000011692 ENSCSEP00000011692 nup88 nup88 nup98 nup98 LOC103393291 LOC103393291 sumo1 sumo1 NUP62 NUP62 rae1 rae1 nup37 nup37 LOC103392282 LOC103392282 LOC103388348 LOC103388348 sumo2 sumo2 LOC103390210 LOC103390210 nup214 nup214 Tpr Tpr LOC103398851 LOC103398851 Nup155 Nup155 ENSCSEP00000026221 ENSCSEP00000026221 Ndc1 Ndc1 LOC103393067 LOC103393067 LOC103393068 LOC103393068 ENSCSEP00000006355 ENSCSEP00000006355 ENSCSEP00000006303 ENSCSEP00000006303 nup50 nup50 satb2 satb2 nup205 nup205 nup107 nup107 nup43 nup43 LOC103378402 LOC103378402 LOC103383557 LOC103383557
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nup35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (298 aa)
NUP54Nucleoporin 54. (584 aa)
ENSCSEP00000033464Achalasia, adrenocortical insufficiency, alacrimia. (399 aa)
nup160Nucleoporin 160. (1083 aa)
nup210Nucleoporin 210. (1835 aa)
nup153Nucleoporin 153. (1445 aa)
LOC103396557Translocated promoter region a, nuclear basket protein. (2514 aa)
RING1Ring finger protein 1. (366 aa)
sec13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)
phc1Polyhomeotic homolog 1. (737 aa)
rnf2Ring finger protein 2. (343 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (826 aa)
nup188Nucleoporin 188. (1748 aa)
ENSCSEP00000023513BED-type domain-containing protein. (594 aa)
ENSCSEP00000023499BED-type domain-containing protein. (731 aa)
LOC103384236Chromobox homolog 8b. (378 aa)
ENSCSEP00000023079Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
HIST1H4JHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
nup42Nucleoporin 42. (434 aa)
seh1lSEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (383 aa)
suz12SUZ12 polycomb repressive complex 2 subunit b. (664 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (652 aa)
LOC103392902BED-type domain-containing protein. (650 aa)
ube2iUbiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
Zbed4Zinc finger, BED-type containing 4. (1128 aa)
LOC103394134SATB homeobox 1a. (894 aa)
ENSCSEP00000018043Uncharacterized protein. (77 aa)
LOC103392195Small ubiquitin-related modifier. (100 aa)
nup133Nucleoporin 133. (1151 aa)
ENSCSEP00000016477Rad60-SLD domain-containing protein. (141 aa)
ENSCSEP00000014019Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (89 aa)
LOC103395080POM121 transmembrane nucleoporin. (1185 aa)
nup58Nucleoporin 58. (592 aa)
bmi1RAWUL domain-containing protein. (144 aa)
ENSCSEP00000011692Ubiquitin-like domain-containing protein. (102 aa)
nup88Nucleoporin 88. (474 aa)
nup98Nucleoporin 98. (1838 aa)
LOC103393291Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
sumo1Small ubiquitin-related modifier. (101 aa)
NUP62Nucleoporin 62. (561 aa)
rae1Ribonucleic acid export 1. (368 aa)
nup37Nucleoporin 37. (364 aa)
LOC103392282RAN binding protein 2. (3022 aa)
LOC103388348SATB homeobox 1b. (883 aa)
sumo2Ubiquitin-like domain-containing protein. (149 aa)
LOC103390210Zinc finger protein 618. (937 aa)
nup214Nup214_FG domain-containing protein. (2068 aa)
TprTranslocated promoter region b, nuclear basket protein. (2370 aa)
LOC103398851Potassium channel tetramerization domain containing 2. (237 aa)
Nup155Nucleoporin 155. (1174 aa)
ENSCSEP00000026221Uncharacterized protein. (78 aa)
Ndc1NDC1 transmembrane nucleoporin. (654 aa)
LOC103393067Chromobox homolog 4 (Pc class homolog, Drosophila). (565 aa)
LOC103393068Chromobox homolog 8a (Pc class homolog, Drosophila). (363 aa)
ENSCSEP00000006355Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (147 aa)
ENSCSEP00000006303Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (95 aa)
nup50Nucleoporin 50. (508 aa)
satb2DNA-binding protein SATB. (897 aa)
nup205Nucleoporin 205. (1991 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (884 aa)
nup43Nucleoporin 43. (346 aa)
LOC103378402Small ubiquitin-related modifier. (94 aa)
LOC103383557Small ubiquitin-related modifier. (96 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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