48 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Tpr	Translocated promoter region b, nuclear basket protein. (2370 aa)
	Nup155	Nucleoporin 155. (1174 aa)
	ENSCSEP00000026221	Uncharacterized protein. (78 aa)
	ranbp3	RAN binding protein 3b. (517 aa)
	LOC103393067	Chromobox homolog 4 (Pc class homolog, Drosophila). (565 aa)
	LOC103393068	Chromobox homolog 8a (Pc class homolog, Drosophila). (363 aa)
	nup188	Nucleoporin 188. (1748 aa)
	LOC103384236	Chromobox homolog 8b. (378 aa)
	nup42	Nucleoporin 42. (434 aa)
	seh1l	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (383 aa)
	LOC103392282	RAN binding protein 2. (3022 aa)
	nup35	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (298 aa)
	LOC103390422	Heterogeneous nuclear ribonucleoprotein K, like. (430 aa)
	LOC103383557	Small ubiquitin-related modifier. (96 aa)
	LOC103378402	Small ubiquitin-related modifier. (94 aa)
	nup43	Nucleoporin 43. (346 aa)
	nup107	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (884 aa)
	nup205	Nucleoporin 205. (1991 aa)
	nup50	Nucleoporin 50. (508 aa)
	nop58	NOP58 ribonucleoprotein homolog (yeast). (536 aa)
	nup37	Nucleoporin 37. (364 aa)
	rae1	Ribonucleic acid export 1. (368 aa)
	sumo1	Small ubiquitin-related modifier. (101 aa)
	LOC103393291	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	nup98	Nucleoporin 98. (1838 aa)
	nup88	Nucleoporin 88. (474 aa)
	ENSCSEP00000011692	Ubiquitin-like domain-containing protein. (102 aa)
	bmi1	RAWUL domain-containing protein. (144 aa)
	nup58	Nucleoporin 58. (592 aa)
	LOC103395080	POM121 transmembrane nucleoporin. (1185 aa)
	nup133	Nucleoporin 133. (1151 aa)
	LOC103392195	Small ubiquitin-related modifier. (100 aa)
	ENSCSEP00000018043	Uncharacterized protein. (77 aa)
	LOC103397093	Uncharacterized protein. (439 aa)
	ube2i	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	hnrnpk	Heterogeneous nuclear ribonucleoprotein K. (401 aa)
	nup85	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (652 aa)
	sumo2	Ubiquitin-like domain-containing protein. (149 aa)
	ENSCSEP00000033464	Achalasia, adrenocortical insufficiency, alacrimia. (399 aa)
	nup160	Nucleoporin 160. (1083 aa)
	nup210	Nucleoporin 210. (1835 aa)
	nup93	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (826 aa)
	rnf2	Ring finger protein 2. (343 aa)
	phc1	Polyhomeotic homolog 1. (737 aa)
	LOC103385815	RRM domain-containing protein. (293 aa)
	RING1	Ring finger protein 1. (366 aa)
	LOC103396557	Translocated promoter region a, nuclear basket protein. (2514 aa)
	LOC103398851	Potassium channel tetramerization domain containing 2. (237 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000011692	ENSCSEP00000026221	ENSCSEP00000011692	ENSCSEP00000026221	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.420
ENSCSEP00000011692	LOC103390422	ENSCSEP00000011692	ENSCSEP00000001502	Ubiquitin-like domain-containing protein.	Heterogeneous nuclear ribonucleoprotein K, like.	0.425
ENSCSEP00000011692	LOC103392282	ENSCSEP00000011692	ENSCSEP00000020800	Ubiquitin-like domain-containing protein.	RAN binding protein 2.	0.923
ENSCSEP00000011692	LOC103393067	ENSCSEP00000011692	ENSCSEP00000024857	Ubiquitin-like domain-containing protein.	Chromobox homolog 4 (Pc class homolog, Drosophila).	0.448
ENSCSEP00000011692	LOC103393291	ENSCSEP00000011692	ENSCSEP00000009731	Ubiquitin-like domain-containing protein.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.825
ENSCSEP00000011692	LOC103396557	ENSCSEP00000011692	ENSCSEP00000028333	Ubiquitin-like domain-containing protein.	Translocated promoter region a, nuclear basket protein.	0.491
ENSCSEP00000011692	LOC103397093	ENSCSEP00000011692	ENSCSEP00000018177	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.425
ENSCSEP00000011692	LOC103398851	ENSCSEP00000011692	ENSCSEP00000026699	Ubiquitin-like domain-containing protein.	Potassium channel tetramerization domain containing 2.	0.785
ENSCSEP00000011692	Nup155	ENSCSEP00000011692	ENSCSEP00000026262	Ubiquitin-like domain-containing protein.	Nucleoporin 155.	0.420
ENSCSEP00000011692	Tpr	ENSCSEP00000011692	ENSCSEP00000026831	Ubiquitin-like domain-containing protein.	Translocated promoter region b, nuclear basket protein.	0.491
ENSCSEP00000011692	hnrnpk	ENSCSEP00000011692	ENSCSEP00000019482	Ubiquitin-like domain-containing protein.	Heterogeneous nuclear ribonucleoprotein K.	0.425
ENSCSEP00000011692	nop58	ENSCSEP00000011692	ENSCSEP00000006789	Ubiquitin-like domain-containing protein.	NOP58 ribonucleoprotein homolog (yeast).	0.620
ENSCSEP00000011692	nup107	ENSCSEP00000011692	ENSCSEP00000005381	Ubiquitin-like domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.552
ENSCSEP00000011692	nup133	ENSCSEP00000011692	ENSCSEP00000016737	Ubiquitin-like domain-containing protein.	Nucleoporin 133.	0.546
ENSCSEP00000011692	nup160	ENSCSEP00000011692	ENSCSEP00000033457	Ubiquitin-like domain-containing protein.	Nucleoporin 160.	0.452
ENSCSEP00000011692	nup205	ENSCSEP00000011692	ENSCSEP00000005423	Ubiquitin-like domain-containing protein.	Nucleoporin 205.	0.443
ENSCSEP00000011692	nup210	ENSCSEP00000011692	ENSCSEP00000033389	Ubiquitin-like domain-containing protein.	Nucleoporin 210.	0.406
ENSCSEP00000011692	nup35	ENSCSEP00000011692	ENSCSEP00000001356	Ubiquitin-like domain-containing protein.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.422
ENSCSEP00000011692	nup37	ENSCSEP00000011692	ENSCSEP00000007235	Ubiquitin-like domain-containing protein.	Nucleoporin 37.	0.462
ENSCSEP00000011692	nup43	ENSCSEP00000011692	ENSCSEP00000005238	Ubiquitin-like domain-containing protein.	Nucleoporin 43.	0.433