STRINGSTRING
LOC103383373 LOC103383373 LOC103391556 LOC103391556 tomm6 tomm6 rps27a rps27a ulk2 ulk2 fndc3b fndc3b ulk1 ulk1 prkn prkn mfn2 mfn2 sqstm1 sqstm1 LOC103378870 LOC103378870 ENSCSEP00000010047 ENSCSEP00000010047 LOC103395689 LOC103395689 fndc3a fndc3a LOC103388495 LOC103388495 LOC103388489 LOC103388489 TOMM7 TOMM7 atg5 atg5 tomm40 tomm40 LOC103390969 LOC103390969 ENSCSEP00000016086 ENSCSEP00000016086 LOC103394065 LOC103394065 FUNDC1 FUNDC1 pgam5 pgam5 LOC103381983 LOC103381983 TOMM20 TOMM20 mfn1 mfn1 CSNK2A2 CSNK2A2 LOC103385228 LOC103385228 ENSCSEP00000023675 ENSCSEP00000023675 vdac1 vdac1 UBB UBB pink1 pink1 mterf3 mterf3 Atg12 Atg12 tomm22 tomm22 LOC103386740 LOC103386740 map1lc3a map1lc3a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103383373Translocase of outer mitochondrial membrane 20b. (146 aa)
LOC103391556Uncharacterized protein. (152 aa)
tomm6Translocase of outer mitochondrial membrane 6 homolog (yeast). (64 aa)
rps27aRibosomal protein S27a. (156 aa)
ulk2Unc-51 like autophagy activating kinase 2. (1027 aa)
fndc3bFibronectin type III domain containing 3Ba. (1205 aa)
ulk1Unc-51 like autophagy activating kinase 1. (1035 aa)
prknE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (447 aa)
mfn2Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (759 aa)
sqstm1Sequestosome 1. (427 aa)
LOC103378870Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily. (322 aa)
ENSCSEP00000010047Microtubule-associated protein 1 light chain 3 beta. (156 aa)
LOC103395689Uncharacterized protein. (331 aa)
fndc3aFibronectin type III domain containing 3A. (1276 aa)
LOC103388495Zgc:86598; Belongs to the protein kinase superfamily. (392 aa)
LOC103388489Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
TOMM7Translocase of outer mitochondrial membrane 7. (55 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
tomm40Translocase of outer mitochondrial membrane 40 homolog, like. (406 aa)
LOC103390969Translocase of outer mitochondrial membrane 5 homolog (yeast). (87 aa)
ENSCSEP00000016086GSAP-16 domain-containing protein. (168 aa)
LOC103394065Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
FUNDC1FUN14 domain containing 1. (176 aa)
pgam5PGAM family member 5, serine/threonine protein phosphatase, mitochondrial. (294 aa)
LOC103381983Zgc:109986. (300 aa)
TOMM20Translocase of outer mitochondrial membrane 20. (157 aa)
mfn1Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (790 aa)
CSNK2A2Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily. (350 aa)
LOC103385228Tyrosine-protein kinase. (551 aa)
ENSCSEP00000023675Uncharacterized protein. (329 aa)
vdac1Voltage-dependent anion channel 1. (283 aa)
UBBUbiquitin B. (744 aa)
pink1PTEN induced kinase 1. (572 aa)
mterf3Mitochondrial transcription termination factor 3. (459 aa)
Atg12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (131 aa)
tomm22Translocase of outer mitochondrial membrane 22 homolog (yeast). (129 aa)
LOC103386740Tyrosine-protein kinase. (558 aa)
map1lc3aMicrotubule-associated protein 1 light chain 3 alpha. (138 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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