38 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103383373	Translocase of outer mitochondrial membrane 20b. (146 aa)
	LOC103391556	Uncharacterized protein. (152 aa)
	tomm6	Translocase of outer mitochondrial membrane 6 homolog (yeast). (64 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	ulk2	Unc-51 like autophagy activating kinase 2. (1027 aa)
	fndc3b	Fibronectin type III domain containing 3Ba. (1205 aa)
	ulk1	Unc-51 like autophagy activating kinase 1. (1035 aa)
	prkn	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (447 aa)
	mfn2	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (759 aa)
	sqstm1	Sequestosome 1. (427 aa)
	LOC103378870	Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily. (322 aa)
	ENSCSEP00000010047	Microtubule-associated protein 1 light chain 3 beta. (156 aa)
	LOC103395689	Uncharacterized protein. (331 aa)
	fndc3a	Fibronectin type III domain containing 3A. (1276 aa)
	LOC103388495	Zgc:86598; Belongs to the protein kinase superfamily. (392 aa)
	LOC103388489	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
	TOMM7	Translocase of outer mitochondrial membrane 7. (55 aa)
	atg5	Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
	tomm40	Translocase of outer mitochondrial membrane 40 homolog, like. (406 aa)
	LOC103390969	Translocase of outer mitochondrial membrane 5 homolog (yeast). (87 aa)
	ENSCSEP00000016086	GSAP-16 domain-containing protein. (168 aa)
	LOC103394065	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
	FUNDC1	FUN14 domain containing 1. (176 aa)
	pgam5	PGAM family member 5, serine/threonine protein phosphatase, mitochondrial. (294 aa)
	LOC103381983	Zgc:109986. (300 aa)
	TOMM20	Translocase of outer mitochondrial membrane 20. (157 aa)
	mfn1	Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (790 aa)
	CSNK2A2	Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily. (350 aa)
	LOC103385228	Tyrosine-protein kinase. (551 aa)
	ENSCSEP00000023675	Uncharacterized protein. (329 aa)
	vdac1	Voltage-dependent anion channel 1. (283 aa)
	UBB	Ubiquitin B. (744 aa)
	pink1	PTEN induced kinase 1. (572 aa)
	mterf3	Mitochondrial transcription termination factor 3. (459 aa)
	Atg12	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (131 aa)
	tomm22	Translocase of outer mitochondrial membrane 22 homolog (yeast). (129 aa)
	LOC103386740	Tyrosine-protein kinase. (558 aa)
	map1lc3a	Microtubule-associated protein 1 light chain 3 alpha. (138 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Atg12	ENSCSEP00000010047	ENSCSEP00000029113	ENSCSEP00000010047	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Microtubule-associated protein 1 light chain 3 beta.	0.857
Atg12	ENSCSEP00000016086	ENSCSEP00000029113	ENSCSEP00000016086	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	GSAP-16 domain-containing protein.	0.807
Atg12	FUNDC1	ENSCSEP00000029113	ENSCSEP00000017834	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	FUN14 domain containing 1.	0.698
Atg12	LOC103391556	ENSCSEP00000029113	ENSCSEP00000001497	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Uncharacterized protein.	0.698
Atg12	atg5	ENSCSEP00000029113	ENSCSEP00000015161	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.999
Atg12	map1lc3a	ENSCSEP00000029113	ENSCSEP00000031109	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Microtubule-associated protein 1 light chain 3 alpha.	0.857
Atg12	mfn1	ENSCSEP00000029113	ENSCSEP00000021160	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.741
Atg12	mfn2	ENSCSEP00000029113	ENSCSEP00000007228	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.741
Atg12	pink1	ENSCSEP00000029113	ENSCSEP00000026950	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	PTEN induced kinase 1.	0.624
Atg12	prkn	ENSCSEP00000029113	ENSCSEP00000006207	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.560
Atg12	sqstm1	ENSCSEP00000029113	ENSCSEP00000008395	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Sequestosome 1.	0.863
Atg12	ulk1	ENSCSEP00000029113	ENSCSEP00000005775	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Unc-51 like autophagy activating kinase 1.	0.917
Atg12	ulk2	ENSCSEP00000029113	ENSCSEP00000004321	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Unc-51 like autophagy activating kinase 2.	0.917
Atg12	vdac1	ENSCSEP00000029113	ENSCSEP00000023781	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Voltage-dependent anion channel 1.	0.687
CSNK2A2	FUNDC1	ENSCSEP00000021723	ENSCSEP00000017834	Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily.	FUN14 domain containing 1.	0.950
CSNK2A2	LOC103378870	ENSCSEP00000021723	ENSCSEP00000009256	Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily.	Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily.	0.900
CSNK2A2	LOC103388489	ENSCSEP00000021723	ENSCSEP00000011987	Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.988
CSNK2A2	LOC103388495	ENSCSEP00000021723	ENSCSEP00000011773	Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily.	Zgc:86598; Belongs to the protein kinase superfamily.	0.950
CSNK2A2	LOC103391556	ENSCSEP00000021723	ENSCSEP00000001497	Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.950
CSNK2A2	LOC103394065	ENSCSEP00000021723	ENSCSEP00000017510	Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.988