STRINGSTRING
ripk1 ripk1 LOC103390066 LOC103390066 ogt ogt LOC103380583 LOC103380583 ENSCSEP00000023759 ENSCSEP00000023759 LOC103387676 LOC103387676 UBB UBB uba52 uba52 ENSCSEP00000025371 ENSCSEP00000025371 ENSCSEP00000025383 ENSCSEP00000025383 pdcd6ip pdcd6ip LOC103396237 LOC103396237 LOC103391373 LOC103391373 CDC37 CDC37 LOC103390031 LOC103390031 LOC103380988 LOC103380988 LOC103377512 LOC103377512 tradd tradd rps27a rps27a LOC103380989 LOC103380989 MLKL MLKL LOC103378994 LOC103378994 LOC103387098 LOC103387098 prkn prkn kxd1 kxd1 LOC103376745 LOC103376745 LOC103395117 LOC103395117 ENSCSEP00000016080 ENSCSEP00000016080 LOC103381684 LOC103381684 ENSCSEP00000019312 ENSCSEP00000019312 ENSCSEP00000019431 ENSCSEP00000019431
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ripk1Receptor (TNFRSF)-interacting serine-threonine kinase 1, like. (679 aa)
LOC103390066TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (596 aa)
ogtO-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1. (1048 aa)
LOC103380583Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (447 aa)
ENSCSEP00000023759Ubiquitin-like domain-containing protein. (92 aa)
LOC103387676Uncharacterized protein. (381 aa)
UBBUbiquitin B. (744 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (151 aa)
ENSCSEP00000025371zf-C3HC4 domain-containing protein. (63 aa)
ENSCSEP00000025383Uncharacterized protein. (139 aa)
pdcd6ipProgrammed cell death 6 interacting protein. (752 aa)
LOC103396237Uncharacterized protein; Belongs to the peptidase C14A family. (464 aa)
LOC103391373X-linked inhibitor of apoptosis. (438 aa)
CDC37Cell division cycle 37 homolog (S. cerevisiae). (376 aa)
LOC103390031Tumor necrosis factor receptor superfamily, member a. (447 aa)
LOC103380988Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2. (728 aa)
LOC103377512TNF superfamily member 10; Belongs to the tumor necrosis factor family. (283 aa)
traddTnfrsf1a-associated via death domain. (288 aa)
rps27aRibosomal protein S27a. (156 aa)
LOC103380989Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1. (724 aa)
MLKLMixed lineage kinase domain like pseudokinase. (461 aa)
LOC103378994TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (384 aa)
LOC103387098Pellino E3 ubiquitin protein ligase 1b. (411 aa)
prknE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (447 aa)
kxd1KxDL motif containing 1. (180 aa)
LOC103376745Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family. (263 aa)
LOC103395117Baculoviral IAP repeat containing 2. (693 aa)
ENSCSEP00000016080Uncharacterized protein; Belongs to the peptidase C14A family. (471 aa)
LOC103381684STIP1 homology and U-Box containing protein 1. (159 aa)
ENSCSEP00000019312Uncharacterized protein. (418 aa)
ENSCSEP00000019431TNF receptor-associated factor. (456 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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