STRINGSTRING
LOC103396322 LOC103396322 polr1e polr1e myo1c myo1c cd3eap cd3eap ENSCSEP00000009560 ENSCSEP00000009560 znrd1 znrd1 ENSCSEP00000010137 ENSCSEP00000010137 LOC103399096 LOC103399096 ENSCSEP00000010388 ENSCSEP00000010388 ENSCSEP00000010656 ENSCSEP00000010656 polr2f polr2f ENSCSEP00000010737 ENSCSEP00000010737 POLR2E POLR2E ercc6 ercc6 LOC103396892 LOC103396892 ENSCSEP00000012570 ENSCSEP00000012570 polr1b polr1b twistnb twistnb ENSCSEP00000014012 ENSCSEP00000014012 H3C14 H3C14 ENSCSEP00000014187 ENSCSEP00000014187 ENSCSEP00000015249 ENSCSEP00000015249 ENSCSEP00000006378 ENSCSEP00000006378 gsk3b gsk3b LOC103381709 LOC103381709 LOC103381809 LOC103381809 ddx21 ddx21 ENSCSEP00000022787 ENSCSEP00000022787 HIST1H4J HIST1H4J ENSCSEP00000023079 ENSCSEP00000023079 polr2h polr2h kat2b kat2b kat2a kat2a polr2k polr2k LOC103394976 LOC103394976 Polr1c Polr1c LOC103385172 LOC103385172 actb actb LOC103399026 LOC103399026 ENSCSEP00000030188 ENSCSEP00000030188 LOC103387999 LOC103387999 LOC103395050 LOC103395050 tbp tbp mybbp1a mybbp1a LOC103395550 LOC103395550 H3-3B H3-3B polr1a polr1a LOC103393872 LOC103393872 EP300 EP300 LOC103397872 LOC103397872 taf1a taf1a smarca5 smarca5 LOC103388034 LOC103388034 taf1c taf1c polr2l polr2l LOC103383494 LOC103383494 ENSCSEP00000005051 ENSCSEP00000005051 LOC103381127 LOC103381127 sf3b1 sf3b1 ENSCSEP00000006274 ENSCSEP00000006274
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103396322Histone H2B; Belongs to the histone H2B family. (116 aa)
polr1eRNA polymerase I subunit E. (402 aa)
myo1cMyosin Ic, paralog b; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1018 aa)
cd3eapCD3e molecule, epsilon associated protein. (380 aa)
ENSCSEP00000009560TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B. (509 aa)
znrd1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (115 aa)
ENSCSEP00000010137E1A binding protein p300 b. (2546 aa)
LOC103399096Histone H2A; Belongs to the histone H2A family. (133 aa)
ENSCSEP00000010388Histone H2B; Belongs to the histone H2B family. (122 aa)
ENSCSEP00000010656Histone domain-containing protein. (119 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
ENSCSEP00000010737Histone H2B; Belongs to the histone H2B family. (117 aa)
POLR2ERNA polymerase II subunit E. (229 aa)
ercc6Excision repair cross-complementation group 6. (1444 aa)
LOC103396892Histone H2A; Belongs to the histone H2A family. (257 aa)
ENSCSEP00000012570Histone H2A; Belongs to the histone H2A family. (218 aa)
polr1bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1134 aa)
twistnbSHS2_Rpb7-N domain-containing protein. (373 aa)
ENSCSEP00000014012Histone H2A; Belongs to the histone H2A family. (131 aa)
H3C14Histone domain-containing protein. (122 aa)
ENSCSEP00000014187Histone H3; Belongs to the histone H3 family. (113 aa)
ENSCSEP00000015249Uncharacterized protein. (146 aa)
ENSCSEP00000006378Histone H3; Belongs to the histone H3 family. (126 aa)
gsk3bGlycogen synthase kinase 3 beta, genome duplicate b. (474 aa)
LOC103381709Histone H3; Belongs to the histone H3 family. (136 aa)
LOC103381809TATA box binding protein like 2. (450 aa)
ddx21DEAD (Asp-Glu-Ala-Asp) box helicase 21. (765 aa)
ENSCSEP00000022787Histone H2A; Belongs to the histone H2A family. (130 aa)
HIST1H4JHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
ENSCSEP00000023079Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (155 aa)
kat2bHistone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (791 aa)
kat2aHistone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (799 aa)
polr2kPolymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
LOC103394976Histone H3; Belongs to the histone H3 family. (136 aa)
Polr1cRNA polymerase I and III subunit C. (346 aa)
LOC103385172Histone H2A; Belongs to the histone H2A family. (128 aa)
actbPutative beta-actin. (375 aa)
LOC103399026Uncharacterized protein. (52 aa)
ENSCSEP00000030188Bromodomain adjacent to zinc finger domain, 1B. (1415 aa)
LOC103387999Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily. (441 aa)
LOC103395050Histone H2A; Belongs to the histone H2A family. (131 aa)
tbpTATA box binding protein. (355 aa)
mybbp1aMYB binding protein (P160) 1a. (1272 aa)
LOC103395550Myosin Ic, paralog a; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1025 aa)
H3-3BHistone H3.3. (136 aa)
polr1aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1628 aa)
LOC103393872Glycogen synthase kinase 3 alpha a. (655 aa)
EP300E1A binding protein p300. (2880 aa)
LOC103397872Histone H2A.V. (128 aa)
taf1aTATA box binding protein (TBP)-associated factor, RNA polymerase I, A. (430 aa)
smarca5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1085 aa)
LOC103388034DEK proto-oncogene. (450 aa)
taf1cUncharacterized protein. (1105 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
LOC103383494Uncharacterized protein. (375 aa)
ENSCSEP00000005051Histone H2B; Belongs to the histone H2B family. (112 aa)
LOC103381127Histone H2A; Belongs to the histone H2A family. (128 aa)
sf3b1Splicing factor 3b, subunit 1. (1291 aa)
ENSCSEP00000006274Histone H2B; Belongs to the histone H2B family. (114 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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