50 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	canx	Calnexin. (639 aa)
	spata5l1	Spermatogenesis associated 5-like 1. (748 aa)
	LOC103393161	Calreticulin. (431 aa)
	LOC103398200	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	engase	Endo-beta-N-acetylglucosaminidase. (722 aa)
	LOC103396665	RING-CH-type domain-containing protein. (904 aa)
	LOC103384251	Calmegin. (666 aa)
	ENSCSEP00000023759	Ubiquitin-like domain-containing protein. (92 aa)
	LOC103399968	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (846 aa)
	LOC103383633	Membrane-associated ring finger (C3HC4) 1. (527 aa)
	MARCHF9	Membrane associated ring-CH-type finger 9. (342 aa)
	SPATA5	Spermatogenesis associated 5. (886 aa)
	LOC103391830	UDP-glucose glycoprotein glucosyltransferase 2. (1482 aa)
	uggt1	UDP-glucose glycoprotein glucosyltransferase 1. (1540 aa)
	ganab	Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family. (841 aa)
	ubxn1	UBX domain protein 1. (304 aa)
	kxd1	KxDL motif containing 1. (180 aa)
	marchf8	Uncharacterized protein. (344 aa)
	LOC103376759	Membrane-associated ring finger (C3HC4) 2. (257 aa)
	LOC103396854	Membrane-associated ring finger (C3HC4) 11. (351 aa)
	ENSCSEP00000011649	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family. (135 aa)
	ENSCSEP00000011676	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family. (118 aa)
	LOC103379226	RING-CH-type domain-containing protein. (246 aa)
	rnf103	Ring finger protein 103. (674 aa)
	LOC103384448	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (569 aa)
	psmc1	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (440 aa)
	rnf139	Ring finger protein 139. (627 aa)
	RAD23B	RAD23 homolog B, nucleotide excision repair protein. (382 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (151 aa)
	UBB	Ubiquitin B. (744 aa)
	ngly1	N-glycanase 1. (628 aa)
	LOC103396470	Calreticulin. (425 aa)
	LOC103389019	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (663 aa)
	man1b1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (625 aa)
	edem1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (635 aa)
	LOC103389212	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (873 aa)
	pdia3	Protein disulfide-isomerase. (526 aa)
	marchf7	Membrane-associated ring finger (C3HC4) 7. (775 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	LOC103399827	Calreticulin. (390 aa)
	mogs	Mannosyl-oligosaccharide glucosidase. (843 aa)
	LOC103385197	Membrane-associated ring finger (C3HC4) 9. (347 aa)
	MARCHF6	Membrane associated ring-CH-type finger 6. (868 aa)
	marchf4	Membrane-associated ring finger (C3HC4) 4. (404 aa)
	pdia4	Protein disulfide-isomerase. (651 aa)
	ENSCSEP00000017874	RING-CH-type domain-containing protein. (248 aa)
	derl1	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (254 aa)
	amfr	Autocrine motility factor receptor b. (600 aa)
	LOC103397105	Uncharacterized protein; Belongs to the AAA ATPase family. (806 aa)
	MARCHF2	Membrane associated ring-CH-type finger 2. (248 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000011649	LOC103384251	ENSCSEP00000011649	ENSCSEP00000022927	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Calmegin.	0.643
ENSCSEP00000011649	LOC103384448	ENSCSEP00000011649	ENSCSEP00000029767	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.459
ENSCSEP00000011649	LOC103393161	ENSCSEP00000011649	ENSCSEP00000020843	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Calreticulin.	0.792
ENSCSEP00000011649	LOC103396470	ENSCSEP00000011649	ENSCSEP00000024406	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Calreticulin.	0.792
ENSCSEP00000011649	LOC103399827	ENSCSEP00000011649	ENSCSEP00000002998	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Calreticulin.	0.792
ENSCSEP00000011649	canx	ENSCSEP00000011649	ENSCSEP00000019667	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Calnexin.	0.643
ENSCSEP00000011649	edem1	ENSCSEP00000011649	ENSCSEP00000033947	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.466
ENSCSEP00000011649	ganab	ENSCSEP00000011649	ENSCSEP00000009428	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family.	0.548
ENSCSEP00000011676	LOC103384251	ENSCSEP00000011676	ENSCSEP00000022927	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Calmegin.	0.643
ENSCSEP00000011676	LOC103384448	ENSCSEP00000011676	ENSCSEP00000029767	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.459
ENSCSEP00000011676	LOC103393161	ENSCSEP00000011676	ENSCSEP00000020843	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Calreticulin.	0.792
ENSCSEP00000011676	LOC103396470	ENSCSEP00000011676	ENSCSEP00000024406	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Calreticulin.	0.792
ENSCSEP00000011676	LOC103399827	ENSCSEP00000011676	ENSCSEP00000002998	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Calreticulin.	0.792
ENSCSEP00000011676	canx	ENSCSEP00000011676	ENSCSEP00000019667	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Calnexin.	0.643
ENSCSEP00000011676	edem1	ENSCSEP00000011676	ENSCSEP00000033947	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.466
ENSCSEP00000011676	ganab	ENSCSEP00000011676	ENSCSEP00000009428	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family.	0.548
ENSCSEP00000017874	LOC103397105	ENSCSEP00000017874	ENSCSEP00000018351	RING-CH-type domain-containing protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.409
ENSCSEP00000017874	LOC103398200	ENSCSEP00000017874	ENSCSEP00000021019	RING-CH-type domain-containing protein.	Valosin containing protein; Belongs to the AAA ATPase family.	0.409
ENSCSEP00000017874	SPATA5	ENSCSEP00000017874	ENSCSEP00000006965	RING-CH-type domain-containing protein.	Spermatogenesis associated 5.	0.409
ENSCSEP00000017874	spata5l1	ENSCSEP00000017874	ENSCSEP00000019910	RING-CH-type domain-containing protein.	Spermatogenesis associated 5-like 1.	0.409